RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	LCE4A	Q5TA78	99 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ACAD10	Q6JQN1	1059 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MTFR2	Q6P444	385 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SLC22A25	Q6T423	547 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	DHRS13	Q6UX07	377 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	LRRC8D	Q7L1W4	858 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARHGEF25	Q86VW2	580 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784		Q8N1X5	172 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	GALNT4	Q8N4A0	578 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	NGEF	Q8N5V2	710 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ENDOV	Q8N8Q3	282 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	GPR150	Q8NGU9	434 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	UCMA	Q8WVF2	138 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CELF1	Q92879	486 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ZBTB10	Q96DT7	871 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	RNFT2	Q96EX2	444 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	APOPT1	Q96IL0	206 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TIMP4	Q99727	224 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PHF7	Q9BWX1	381 aa	Predicted RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	AGXT2	Q9BYV1	514 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TAOK3	Q9H2K8	898 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PNN	Q9H307	717 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MROH8	Q9H579	483 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SYNPO2L	Q9H987	977 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ALG13	Q9NP73	1137 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CNOT7	Q9UIV1	285 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ISY1	Q9ULR0	285 aa	Known RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CYP46A1	Q9Y6A2	500 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARID1B	Q8NFD5	2236 aa	Predicted RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARHGAP5	Q13017	1502 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ZFYVE16	Q7Z3T8	1539 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARHGAP31	Q2M1Z3	1444 aa		3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CENPJ	Q9HC77	1338 aa	Predicted RBP	3.44	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MROH2A	A6NES4	1674 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SETBP1	Q9Y6X0	1596 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ERCC6	Q03468	1493 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	POLR3A	O14802	1390 aa	Predicted RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784		B4E171	279 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	POC1B-GALNT4	F8VUJ3	575 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	UBE2Q2L	H0YL09	131 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SPTLC2	O15270	562 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	FZD7	O75084	574 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	GUCY1B2	O75343	617 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	METTL18	O95568	372 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ENO1	P06733	434 aa	Known RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TPM2	P07951	284 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CYP4B1	P13584	511 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PKM	P14618	531 aa	Known RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARSA	P15289	507 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ABCD3	P28288	659 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	IDUA	P35475	653 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TSPAN7	P41732	249 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PAFAH1B1	P43034	410 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	RPS6KA3	P51812	740 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MVD	P53602	400 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SOX10	P56693	466 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ARHGAP8	P85298	464 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	NAA25	Q14CX7	972 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ANXA2R	Q3ZCQ2	193 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CERKL	Q49MI3	558 aa	Predicted RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	GXYLT1	Q4G148	440 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SH2D4B	Q5SQS7	431 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	OLFML1	Q6UWY5	402 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	C1orf122	Q6ZSJ8	110 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	RNF144B	Q7Z419	303 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TFAP2D	Q7Z6R9	452 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TMEM200A	Q86VY9	491 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CHSY1	Q86X52	802 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	BRSK2	Q8IWQ3	736 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SCN4B	Q8IWT1	228 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PNLDC1	Q8NA58	520 aa	Known RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TBC1D22A	Q8WUA7	517 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	RFFL	Q8WZ73	363 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ZNF764	Q96H86	408 aa	Predicted RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CD180	Q99467	661 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SENP7	Q9BQF6	1050 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TTYH1	Q9H313	450 aa	Predicted RBP	3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SLC22A11	Q9NSA0	550 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ALKBH4	Q9NXW9	302 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	AASS	Q9UDR5	926 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	SERGEF	Q9UGK8	458 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	CD207	Q9UJ71	328 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	WNT6	Q9Y6F9	365 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MROH1	Q8NDA8	1641 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	PTPRT	O14522	1441 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	NCAN	O14594	1321 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	QRICH2	Q9H0J4	1663 aa		3.43	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	NRXN1	Q9ULB1	1477 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	ANKRD26	Q9UPS8	1709 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	FAM90A7P	A6NKC0	464 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	FAM90A22P	A8MWA6	464 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	FAM90A12P	A8MX19	464 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	FAM90A23P	A8MXZ1	464 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	TMEM232	C9JQI7	657 aa		3.42	□□□□□ -1.86
CALCOCO2-216	ENST00000509784	MCIDAS	D6RGH6	385 aa		3.42	□□□□□ -1.86

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms