RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 ARHGEF35A5YM69 484 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 FAM47DPA6NHR8 397 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 HNRNPCL2B2RXH8 293 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ENPP3O14638 875 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CAPN9O14815 690 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 POLR1CO15160 346 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 TEX28O15482 410 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 YKT6O15498 198 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 SULT1B1O43704 296 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 DFNA5O60443 496 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 KPNA6O60684 536 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 TRIM3O75382 744 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 SURF6O75683 361 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 RHOBTB1O94844 696 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 SUPT7LO94864 414 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 SNX4O95219 450 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CLPTM1O96005 669 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 TFRCP02786 760 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 FUCA1P04066 466 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 RPN1P04843 607 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 CYP2C8P10632 490 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 HSPD1P10809 573 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 COL6A1P12109 1028 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 P4HA1P13674 534 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 RPS2P15880 293 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 CYP3A5P20815 502 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 IL10P22301 178 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 NMT1P30419 496 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 PRKAR1BP31321 381 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 FDFT1P37268 417 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ETV6P41212 452 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 SLC1A1P43005 524 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 HARS2P49590 506 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 TMED10P49755 219 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 ATXN1P54253 815 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 VCPP55072 806 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 CASP7P55210 303 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 AP1S2P56377 157 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 GNG2P59768 71 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 IFITM2Q01629 132 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 UBXN1Q04323 297 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ABHD18Q0P651 414 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CAMK2GQ13555 558 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 NFE2L1Q14494 772 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 RPS6KA1Q15418 735 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 NPTX1Q15818 432 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 INF2Q27J81 1249 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 EDRF1Q3B7T1 1238 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 GTDC1Q4AE62 458 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 NADK2Q4G0N4 442 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 FAM133BQ5BKY9 247 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 WDR45BQ5MNZ6 344 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ZBTB41Q5SVQ8 909 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 HYIQ5T013 277 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 METTL21CQ5VZV1 264 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 KAZNQ674X7 775 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 SHQ1Q6PI26 577 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 USP50Q70EL3 339 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 G2E3Q7L622 706 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ARPINQ7Z6K5 226 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 TFAP2DQ7Z6R9 452 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 NT5DC3Q86UY8 548 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CAND1Q86VP6 1230 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 LRRC6Q86X45 466 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 DZIP1Q86YF9 867 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 TRIM59Q8IWR1 403 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 DNAJC10Q8IXB1 793 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 PM20D2Q8IYS1 436 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 HACE1Q8IYU2 909 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 GUF1Q8N442 669 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 PIK3C3Q8NEB9 887 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 NCOA7Q8NI08 942 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CALML6Q8TD86 181 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 USP6NLQ92738 828 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CD101Q93033 1021 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 P2RX5Q93086 422 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 TTC17Q96AE7 1141 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 EAF2Q96CJ1 260 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 PLEKHA8Q96JA3 519 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 OPALINQ96PE5 141 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ZNF347Q96SE7 839 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 PTPN18Q99952 460 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 GPATCH1Q9BRR8 931 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 C1orf50Q9BV19 199 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ANKRD60Q9BZ19 345 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 FRMD8P1Q9BZ68 369 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 LRRC27Q9C0I9 530 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 WDR12Q9GZL7 423 aaKnown RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 KLHL25Q9H0H3 589 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 CCDC8Q9H0W5 538 aaPredicted RBP2.32□□□□□ -2.04
CAST-226ENST00000509529 GANQ9H2C0 597 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 OR51B5Q9H339 312 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 TM9SF3Q9HD45 589 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 AKIP1Q9NQ31 210 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 MAN1C1Q9NR34 630 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ARHGEF38Q9NXL2 777 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 BCAP29Q9UHQ4 241 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 ZNF180Q9UJW8 692 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 MAFFQ9ULX9 164 aa2.32□□□□□ -2.04
CAST-226ENST00000509529 G3BP2Q9UN86 482 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms