RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 LTB4R2Q9NPC1 389 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 PCDHB16Q9NRJ7 776 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 RBM28Q9NW13 759 aaKnown RBP4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 ANO10Q9NW15 660 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 DDX43Q9NXZ2 648 aaKnown RBP4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 TRPM5Q9NZQ8 1165 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 CLDN16Q9Y5I7 305 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 POMT1Q9Y6A1 747 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 SESN1Q9Y6P5 492 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 COL15A1P39059 1388 aa4.51□□□□□ -1.69
SMARCA5-202ENST00000508573 IGSF1Q8N6C5 1336 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TRAV34A0A0B4J273 112 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 A0A0G2JPF8 293 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 LRRD1A4D1F6 860 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A18PA6NE21 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A16PA6NEW6 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A5PA8MXJ8 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TMEM233B4DJY2 109 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 HNRNPCL3B7ZW38 293 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TMEM232C9JQI7 657 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 PYCARD-AS1I3L0S3 204 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TNPO2O14787 897 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF263O14978 683 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CCP110O43303 1012 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CA12O43570 354 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC25A17O43808 307 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 PAHP00439 452 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 INHBAP08476 426 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A15PP0C7V4 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A14PP0C7W9 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 HNRNPCL4P0DMR1 293 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CKBP12277 381 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CPA1P15085 419 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TYMPP19971 482 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KCNA5P22460 613 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CPT2P23786 658 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KLRK1P26718 216 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CASRP41180 1078 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ACAA2P42765 397 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MTIF2P46199 727 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 PIP4K2AP48426 406 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ARCN1P48444 511 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CLK3P49761 638 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 NT5C2P49902 561 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM189BP81408 668 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 COG7P83436 770 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CDC42EP1Q00587 391 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 PPARAQ07869 468 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MGAT5Q09328 741 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CTBP1Q13363 440 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CAMK1Q14012 370 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TRADDQ15628 312 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 NFIL3Q16649 462 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 BTBD16Q32M84 506 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TTC22Q5TAA0 569 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 DRICH1Q6PGQ1 229 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ANGPTL8Q6UXH0 198 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM83HQ6ZRV2 1179 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 C15orf52Q6ZUT6 534 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MARK2Q7KZI7 788 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CHST3Q7LGC8 479 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KANSL1Q7Z3B3 1105 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 UBE3BQ7Z3V4 1068 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KRT28Q7Z3Y7 464 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 SPATA2LQ8IUW3 424 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CNTN4Q8IWV2 1026 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 RHOT2Q8IXI1 618 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 GLB1L3Q8NCI6 653 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CNNM3Q8NE01 707 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 OR56A3Q8NH54 315 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KIF18AQ8NI77 898 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 BRIX1Q8TDN6 353 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 KCNE4Q8WWG9 221 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TUBGCP3Q96CW5 907 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 GIMAP5Q96F15 307 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 RAB3IPQ96QF0 476 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 LBHD1Q9BQE6 289 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 NDC1Q9BTX1 674 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MAK16Q9BXY0 300 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 HAPLN2Q9GZV7 340 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ISCUQ9H1K1 167 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 MRPL46Q9H2W6 279 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 SMARCAD1Q9H4L7 1026 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNHIT6Q9NWK9 470 aaKnown RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 SUCLA2Q9P2R7 463 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CLIP2Q9UDT6 1046 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 AURKCQ9UQB9 309 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 LIPT1Q9Y234 373 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 CAB39Q9Y376 341 aaPredicted RBP4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 TRPV2Q9Y5S1 764 aa4.5□□□□□ -1.69
SMARCA5-202ENST00000508573 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RNF103-CHMP3A0A140T963 221 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 LIPT2A6NK58 231 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms