RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DOCK9Q9BZ29 2069 aa5.95□□□□□ -1.46
GYPB-208ENST00000507009 ITIH6Q6UXX5 1313 aa5.95□□□□□ -1.46
GYPB-208ENST00000507009 MGAQ8IWI9 3026 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ATMQ13315 3056 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 A0A1B0GVL5 298 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 TARSL2A2RTX5 802 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 PRAMEF26H0Y7S4 382 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 CAPN5O15484 640 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 IRAK2O43187 625 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 MAGEC1O60732 1142 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 RNGTTO60942 597 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 NEBLO76041 1014 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 LUC7L3O95232 432 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 WISP1O95388 367 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 APOEP02649 317 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 SRPRAP08240 638 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 ALPPL2P10696 532 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 VDRP11473 427 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 C6P13671 934 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 PFKFB1P16118 471 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 DGKAP23743 735 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 BRD2P25440 801 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 RPL13P26373 211 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 RBMS1P29558 406 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 UCNP55089 124 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 CLDN2P57739 230 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 NFKB2Q00653 900 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 VAC14Q08AM6 782 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 KCNMA1Q12791 1236 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 CNTN1Q12860 1018 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ZNF211Q13398 564 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 ELAVL3Q14576 367 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 CDKN3Q16667 212 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 SETMARQ53H47 684 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 MPP7Q5T2T1 576 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 OR6B2Q6IFH4 312 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 MSANTD2Q6P1R3 559 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 Q6ZVU0 165 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 KANSL1Q7Z3B3 1105 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 TRIM46Q7Z4K8 759 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 DSG4Q86SJ6 1040 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 SLC25A45Q8N413 288 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 TTC39CQ8N584 583 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ZNF557Q8N988 423 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 OR4C6Q8NH72 309 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 IFI44Q8TCB0 444 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 DQX1Q8TE96 717 aaKnown RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 OR8D1Q8WZ84 308 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 PTPRN2Q92932 1015 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 RNF34Q969K3 372 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ARRDC3Q96B67 414 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 LMLNQ96KR4 655 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 FCRL2Q96LA5 508 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 ZNF578Q96N58 590 aaPredicted RBP5.94□□□□□ -1.46
GYPB-208ENST00000507009 FAM117AQ9C073 453 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ERVMER34-1Q9H9K5 563 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 POLR1BQ9H9Y6 1135 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 CNGB3Q9NQW8 809 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 ST7Q9NRC1 585 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 THSD1Q9NS62 852 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 DNAJC28Q9NX36 388 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 TJP2Q9UDY2 1190 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 STOML2Q9UJZ1 356 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 SARDHQ9UL12 918 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 SATB2Q9UPW6 733 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 NAALADL1Q9UQQ1 740 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 TRAF3IP3Q9Y228 551 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 PCDHB4Q9Y5E5 795 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 KNTC1P50748 2209 aa5.94□□□□□ -1.46
GYPB-208ENST00000507009 MYO18BQ8IUG5 2567 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 A0A1W2PQU0 124 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 PMS2P1A4D2B8 440 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 O00370 1275 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 KPNA3O00505 521 aaPredicted RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 LATO43561 262 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 STX10O60499 249 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 PIAS2O75928 621 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 PCDH8O95206 1070 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 IGLV3-27P01718 113 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 SETSIPP0DME0 302 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 EPB41P11171 864 aaKnown RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 TACR2P21452 398 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 AKT2P31751 481 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 YWHAEP62258 255 aaKnown RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 DNM1Q05193 864 aaKnown RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 CUL2Q13617 745 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 DRAP1Q14919 205 aaPredicted RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 DEFB133Q30KQ1 61 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 CBWD6Q4V339 395 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 ZC3H12AQ5D1E8 599 aaKnown RBP5.93□□□□□ -1.46
GYPB-208ENST00000507009 MS4A13Q5J8X5 152 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 CBWD3Q5JTY5 395 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 CBWD5Q5RIA9 395 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 FAM46CQ5VWP2 391 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 ERICH6BQ5W0A0 696 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 PMF1Q6P1K2 205 aa5.93□□□□□ -1.46
GYPB-208ENST00000507009 TMEM270Q6UE05 265 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms