RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MAPKAPK2P49137 400 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 ARF5P84085 180 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 BYSLQ13895 437 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 ELF2Q15723 593 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 TSR1Q2NL82 804 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 ZNF783Q6ZMS7 281 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 SLC41A1Q8IVJ1 513 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 KIAA2013Q8IYS2 634 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 NIPA2Q8N8Q9 360 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 RTL3Q8N8U3 475 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 ARHGEF2Q92974 986 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 TOE1Q96GM8 510 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 SPACA7Q96KW9 195 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 CCDC42Q96M95 316 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 KLC2Q9H0B6 622 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 DEF6Q9H4E7 631 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 DHX35Q9H5Z1 703 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 RETREG1Q9H6L5 497 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 CEP192Q8TEP8 1941 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
SMN1-204ENST00000506163 WASH4PA8MWX3 477 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 RNF103O00237 685 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 CBX4O00257 560 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 PRPSAP2O60256 369 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 H2AFZP0C0S5 128 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 CD6P30203 668 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 METAP1P53582 386 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 PIGHQ14442 188 aaPredicted RBP18.25■□□□□ 0.51
SMN1-204ENST00000506163 KCNT1Q5JUK3 1230 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 PLA2G2CQ5R387 149 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 H2AFVQ71UI9 128 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 ARMCX6Q7L4S7 300 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 LPCAT2Q7L5N7 544 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 C11orf74Q86VG3 221 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 MMAAQ8IVH4 418 aaKnown RBP18.25■□□□□ 0.51
SMN1-204ENST00000506163 ZNF564Q8TBZ8 553 aaPredicted RBP18.25■□□□□ 0.51
SMN1-204ENST00000506163 C2orf49Q9BVC5 232 aaPredicted RBP18.25■□□□□ 0.51
SMN1-204ENST00000506163 ATP13A1Q9HD20 1204 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 SEMA4GQ9NTN9 838 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 TMEM74BQ9NUR3 256 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 SERGEFQ9UGK8 458 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 SLC25A13Q9UJS0 675 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 LAMA1P25391 3075 aa18.25■□□□□ 0.51
SMN1-204ENST00000506163 MID1O15344 667 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 DHPSP49366 369 aaPredicted RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 KRT83P78385 493 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 RPL6Q02878 288 aaKnown RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 CREB5Q02930 508 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 SLC25A11Q02978 314 aaKnown RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 ACAP1Q15027 740 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 SMTNL2Q2TAL5 461 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 ACCSLQ4AC99 568 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 ZNF776Q68DI1 518 aaPredicted RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 Q6ZVU0 165 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 FAM124AQ86V42 546 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 EPAS1Q99814 870 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 FBRSQ9HAH7 460 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 CWC15Q9P013 229 aaKnown RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 CTTNBP2NLQ9P2B4 639 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 IP6K2Q9UHH9 426 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 SARDHQ9UL12 918 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 CEP250Q9BV73 2442 aa18.24■□□□□ 0.51
SMN1-204ENST00000506163 TNRC6BQ9UPQ9 1833 aaKnown RBP18.24■□□□□ 0.51
SMN1-204ENST00000506163 MYO1FO00160 1098 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 TMEM253P0C7T8 217 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 RARAP10276 462 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 GOT1P17174 413 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 DESP17661 470 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ACSL1P33121 698 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 NNMTP40261 264 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 TPI1P60174 286 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 CST6Q15828 149 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 SLC36A4Q6YBV0 504 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 PSTKQ8IV42 348 aaKnown RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 ATP11CQ8NB49 1132 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 NETO2Q8NC67 525 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ZNF419Q96HQ0 510 aaPredicted RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 GPR174Q9BXC1 333 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 MAGEH1Q9H213 219 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 ZWILCHQ9H900 591 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 PCDHGA5Q9Y5G8 931 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 RAMP2O60895 175 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ACADMP11310 421 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ITPKAP23677 461 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 MPLP40238 635 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 PI4KAP42356 2102 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 ELAVL3Q14576 367 aaKnown RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 POLD3Q15054 466 aaPredicted RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 SF3A2Q15428 464 aaKnown RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 ATP13A4Q4VNC1 1196 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
SMN1-204ENST00000506163 SPDYCQ5MJ68 293 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 IL31Q6EBC2 164 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 TCEAL6Q6IPX3 200 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 RFX8Q6ZV50 586 aa18.23■□□□□ 0.51
SMN1-204ENST00000506163 UMODL1-AS1Q8N2C9 162 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 504.1 ms