RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 VEGFCP49767 419 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 ZNF543Q08ER8 600 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 GALEQ14376 348 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 CYB5RLQ6IPT4 315 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 EXOC3L1Q86VI1 746 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 PALB2Q86YC2 1186 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 ZNF333Q96JL9 665 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 SARGQ9BW04 601 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 EIF2AQ9BY44 585 aaKnown RBP4.22□□□□□ -1.73
VPS50-219ENST00000495039 DDX21Q9NR30 783 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS50-219ENST00000495039 CA14Q9ULX7 337 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 RAI2Q9Y5P3 530 aa4.22□□□□□ -1.73
VPS50-219ENST00000495039 CYP3A7-CYP3A51PA0A087WV96 503 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 LOC105369274A0A096LPK9 316 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 IGLV5-52A0A0A0MRZ9 124 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 LOC102723532A0A0G2JNH3 316 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 A0A1W2PPC4 97 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 ANTXRLA6NF34 631 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 M0QYT0 321 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 LMX1BO60663 402 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 NDST3O95803 873 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 MYL1P05976 194 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 TRIM27P14373 513 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 CYP3A7P24462 503 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 GRK5P34947 590 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 FOXL2P58012 376 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 BNC1Q01954 994 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 RHAGQ02094 409 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 SNTA1Q13424 505 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 SAFBQ15424 915 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS50-219ENST00000495039 STPG1Q5TH74 334 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 OR4N4Q8N0Y3 316 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 HORMAD2Q8N7B1 307 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 RNF152Q8N8N0 203 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 SLC35F5Q8WV83 523 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS50-219ENST00000495039 ABHD16BQ9H3Z7 469 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 HELLSQ9NRZ9 838 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 RGL1Q9NZL6 768 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 FAM50BQ9Y247 325 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 ZBTB1Q9Y2K1 713 aa4.21□□□□□ -1.74
VPS50-219ENST00000495039 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 PQBP1O60828 265 aaKnown RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 CYP3A4P08684 503 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 TSHRP16473 764 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 C21orf33P30042 268 aaPredicted RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 CCSAPQ6IQ19 270 aaPredicted RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 ZNF771Q7L3S4 317 aaPredicted RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 SPEM1Q8N4L4 309 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 MIGA1Q8NAN2 632 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 PJA1Q8NG27 643 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 TMEM163Q8TC26 289 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 IL17FQ96PD4 163 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 SLC25A33Q9BSK2 321 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 COLEC11Q9BWP8 271 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 FRMD8Q9BZ67 464 aaPredicted RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 ZDHHC7Q9NXF8 308 aa4.2□□□□□ -1.74
VPS50-219ENST00000495039 AGO1Q9UL18 857 aaKnown RBP4.2□□□□□ -1.74
VPS50-219ENST00000495039 PAK4O96013 591 aaPredicted RBP4.19□□□□□ -1.74
VPS50-219ENST00000495039 LDLRP01130 860 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 NBPF7P0C2Y1 421 aaPredicted RBP4.19□□□□□ -1.74
VPS50-219ENST00000495039 UNGP13051 313 aaPredicted RBP4.19□□□□□ -1.74
VPS50-219ENST00000495039 AMD1P17707 334 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 ANOS1P23352 680 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 THPOP40225 353 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 CYP2J2P51589 502 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 CRIP2P52943 208 aaPredicted RBP4.19□□□□□ -1.74
VPS50-219ENST00000495039 RETSATQ6NUM9 610 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 ANKS1BQ7Z6G8 1248 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 NAGSQ8N159 534 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 GLIS1Q8NBF1 620 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 POC1AQ8NBT0 407 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 MCRS1Q96EZ8 462 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 UHRF2Q96PU4 802 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 GFM1Q96RP9 751 aaKnown RBP4.19□□□□□ -1.74
VPS50-219ENST00000495039 ARNT2Q9HBZ2 717 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 ARL15Q9NXU5 204 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 SLC12A4Q9UP95 1085 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 MAN2B2Q9Y2E5 1009 aa4.19□□□□□ -1.74
VPS50-219ENST00000495039 SAA2-SAA4A0A096LPE2 208 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 APAF1O14727 1248 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 CER1O95813 267 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 PIK3CBP42338 1070 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 CDH12P55289 794 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 ZBTB16Q05516 673 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 PLK5Q496M5 336 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 MAP9Q49MG5 647 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 VWA5B1Q5TIE3 1220 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 MON1BQ7L1V2 547 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 C11orf96Q7Z7L8 435 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 TRABD2AQ86V40 505 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 CCDC146Q8IYE0 955 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 CEP76Q8TAP6 659 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 REXO5Q96IC2 774 aaKnown RBP4.18□□□□□ -1.74
VPS50-219ENST00000495039 C1QTNF5Q9BXJ0 243 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 HIPK3Q9H422 1215 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 GAREM1Q9H706 876 aa4.18□□□□□ -1.74
VPS50-219ENST00000495039 RAB21Q9UL25 225 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms