RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MOCS3O95396 460 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 WNT1P04628 370 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 TPM2P07951 284 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 SPINK2P20155 84 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 RRM1P23921 792 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 ADRA1BP35368 520 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 PSMD8P48556 350 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 ZNF165P49910 485 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 ZBTB16Q05516 673 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 POM121L1PQ3SYA9 428 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 NCEH1Q6PIU2 408 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 Q6ZVU0 165 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-212ENST00000493940 HDDC3Q8N4P3 179 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 SNX19Q92543 992 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 HAPLN3Q96S86 360 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 TTYH3Q9C0H2 523 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 FBRSQ9HAH7 460 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 TM9SF3Q9HD45 589 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
HSPG2-212ENST00000493940 VPS28Q9UK41 221 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 GOLGA4Q13439 2230 aaKnown RBP12.94□□□□□ -0.34
HSPG2-212ENST00000493940 MYLKQ15746 1914 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SPAARA0A1B0GVQ0 90 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SYCE3A1L190 88 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 LRRC53A6NM62 1247 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SIGLEC16A6NMB1 481 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SH3BP5O60239 455 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 RTN2O75298 545 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 PROS1P07225 676 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 RHOCP08134 193 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 CSRP1P21291 193 aaKnown RBP12.93□□□□□ -0.34
HSPG2-212ENST00000493940 ACVRL1P37023 503 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 DPP6P42658 865 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 PTPN9P43378 593 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-212ENST00000493940 GSCP56915 257 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-212ENST00000493940 NR1I3Q14994 352 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 TRIM72Q6ZMU5 477 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SND1Q7KZF4 910 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 17.4
HSPG2-212ENST00000493940 ZNF571Q7Z3V5 609 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-212ENST00000493940 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 MCOLN2Q8IZK6 566 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 CHST14Q8NCH0 376 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 FAM131CQ96AQ9 280 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 CAAP1Q9H8G2 361 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SGK2Q9HBY8 427 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 HS3ST2Q9Y278 367 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 FNDC3AQ9Y2H6 1198 aaKnown RBP12.93□□□□□ -0.34
HSPG2-212ENST00000493940 DAAM1Q9Y4D1 1078 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
HSPG2-212ENST00000493940 ZZEF1O43149 2961 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 CCP110O43303 1012 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-212ENST00000493940 BNIP3LO60238 219 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 RNASEH2AO75792 299 aaKnown RBP12.92□□□□□ -0.34
HSPG2-212ENST00000493940 IL1BP01584 269 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 KRT3P12035 628 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 SKILP12757 684 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 CEACAM1P13688 526 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 GOT1P17174 413 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 OR1E1P30953 314 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ADPRHP54922 357 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 TAS2R38P59533 333 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 PPP2CBP62714 309 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 PPP2CAP67775 309 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ARF5P84085 180 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 SULT2A1Q06520 285 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 HLA-BQ31612 363 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 KIAA0895LQ68EN5 471 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ACAD10Q6JQN1 1059 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-212ENST00000493940 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 DRC7Q8IY82 874 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 NETO2Q8NC67 525 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 C3orf20Q8ND61 904 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 OR2A12Q8NGT7 310 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 GANCQ8TET4 914 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 KLC2Q9H0B6 622 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 TNKS2Q9H2K2 1166 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 NOL6Q9H6R4 1146 aaKnown RBP12.92□□□□□ -0.34
HSPG2-212ENST00000493940 GAREM1Q9H706 876 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 SEPT11Q9NVA2 429 aaKnown RBP12.92□□□□□ -0.34
HSPG2-212ENST00000493940 ARHGAP20Q9P2F6 1191 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms