RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ARHGEF26Q96DR7 871 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 PCED1BQ96HM7 432 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 TGS1Q96RS0 853 aaKnown RBP6.88□□□□□ -1.31
TRA2B-216ENST00000493864 KCNK16Q96T55 309 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 SMOQ99835 787 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 DUSP16Q9BY84 665 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 ZBP1Q9H171 429 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 MTRRQ9UBK8 725 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 HESX1Q9UBX0 185 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 TRIM10Q9UDY6 481 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 CHORDC1Q9UHD1 332 aaPredicted RBP6.88□□□□□ -1.31
TRA2B-216ENST00000493864 PLAAQ9Y263 795 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 TNPO3Q9Y5L0 923 aaKnown RBP6.88□□□□□ -1.31
TRA2B-216ENST00000493864 CDY1Q9Y6F8 540 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 DUSP10Q9Y6W6 482 aa6.88□□□□□ -1.31
TRA2B-216ENST00000493864 TSC2P49815 1807 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 C5orf67F2Z3F1 127 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PJA2O43164 708 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CSPG5O95196 566 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 IPO7O95373 1038 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SEC24AO95486 1093 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 URODP06132 367 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CNPP09543 421 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CCDC175P0C221 793 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 FAM200BP0CF97 657 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SETSIPP0DME0 302 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CTSAP10619 480 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PYGMP11217 842 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ABCB4P21439 1286 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MMP8P22894 467 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 VIPR1P32241 457 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 NSFP46459 744 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MAPKAPK2P49137 400 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 VAV2P52735 878 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MAP3K7CLP57077 242 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 YBX1P67809 324 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 GPC5P78333 572 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SMAD3P84022 425 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ROR1Q01973 937 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 BST2Q10589 180 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 GPR17Q13304 367 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 GPM6BQ13491 265 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CAMK1Q14012 370 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ZNF460Q14592 562 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PTPN14Q15678 1187 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MAPRE1Q15691 268 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 RAB30Q15771 203 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 NFE2Q16621 373 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 EGFLAMQ63HQ2 1017 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 STEAP3Q658P3 488 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SLC8B1Q6J4K2 584 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 C4orf50Q6ZRC1 276 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MMS22LQ6ZRQ5 1243 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MON1BQ7L1V2 547 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ZSCAN30Q86W11 494 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ERICH1Q86X53 443 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PHF13Q86YI8 300 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SCN4BQ8IWT1 228 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 GPR65Q8IYL9 337 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ZMIZ2Q8NF64 920 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SEC14L1Q92503 715 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PPP1R13BQ96KQ4 1090 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 SAMD11Q96NU1 681 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PGLYRP2Q96PD5 576 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 CPXM1Q96SM3 734 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 C11orf70Q9BRQ4 267 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 THAP2Q9H0W7 228 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MRPL17Q9NRX2 175 aaKnown RBP6.87□□□□□ -1.31
TRA2B-216ENST00000493864 ADAM22Q9P0K1 906 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MYO1AQ9UBC5 1043 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 LZTS1Q9Y250 596 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 COQ6Q9Y2Z9 468 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PAXBP1Q9Y5B6 917 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 MYH10P35580 1976 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 PLXNA4Q9HCM2 1894 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 NCOR1O75376 2440 aa6.87□□□□□ -1.31
TRA2B-216ENST00000493864 VCANP13611 3396 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 ATP8B3O60423 1300 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 WDR27A2RRH5 827 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 MTMR11A4FU01 709 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 ANKRD62A6NC57 917 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 EPOPA6NHQ4 379 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 HIDE1A8MVS5 230 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 HHLA1C9JL84 531 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 H3BNC9 293 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 RFXAPO00287 272 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 KRIT1O00522 736 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 HGSO14964 777 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-216ENST00000493864 XPO1O14980 1071 aaKnown RBP6.86□□□□□ -1.31
TRA2B-216ENST00000493864 TEX28O15482 410 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 ZSCAN12O43309 604 aa6.86□□□□□ -1.31
TRA2B-216ENST00000493864 SOAT2O75908 522 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms