RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
CTSA-209ENST00000493522 TMEM215Q68D42 235 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 TXNRD3NBQ6F5E7 133 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 TCEAL6Q6IPX3 200 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 PSAPL1Q6NUJ1 521 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
CTSA-209ENST00000493522 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 PSTKQ8IV42 348 aaKnown RBP11.89□□□□□ -0.51
CTSA-209ENST00000493522 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 IL17RCQ8NAC3 791 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 TCEAL3Q969E4 200 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 ACOX2Q99424 681 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 CATSPERBQ9H7T0 1116 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 KLHL11Q9NVR0 708 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 CACNA2D2Q9NY47 1150 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 MMP17Q9ULZ9 603 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 NEU3Q9UQ49 428 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 STARD13Q9Y3M8 1113 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 CACNA1GO43497 2377 aa11.89□□□□□ -0.51
CTSA-209ENST00000493522 H3BRJ5 948 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 SGK1O00141 431 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 FGF10O15520 208 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 DAPK3O43293 454 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 BUB1O43683 1085 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 SPOPO43791 374 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 ASLP04424 464 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 ATP5BP06576 529 aaKnown RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 TNNT1P13805 278 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 HOXB2P14652 356 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 GOT1P17174 413 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 NTSR1P30989 418 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 HTR7P34969 479 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 ARL4AP40617 200 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 MAPKAPK2P49137 400 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 HADHBP55084 474 aaKnown RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 CCZ1BP86790 482 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 CCZ1P86791 482 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 SLC12A1Q13621 1099 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 ZNF234Q14588 700 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 BOLA3Q53S33 107 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 SERPINA13PQ6UXR4 307 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 APCDD1Q8J025 514 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 RTL3Q8N8U3 475 aaKnown RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 TSTD1Q8NFU3 115 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 OR52K2Q8NGK3 314 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 ERLEC1Q96DZ1 483 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 GOLPH3Q9H4A6 298 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 POLR3BQ9NW08 1133 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 TMEM248Q9NWD8 314 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 THAP10Q9P2Z0 257 aaPredicted RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 ZNF212Q9UDV6 495 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 INTS6Q9UL03 887 aaKnown RBP11.88□□□□□ -0.51
CTSA-209ENST00000493522 HCN2Q9UL51 889 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 TBC1D30Q9Y2I9 924 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 FAM208BQ5VWN6 2430 aa11.88□□□□□ -0.51
CTSA-209ENST00000493522 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 DCLK1O15075 740 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 NPC1O15118 1278 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 PJA2O43164 708 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 TIMM44O43615 452 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 ADAM23O75077 832 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 PROS1P07225 676 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 KRT7P08729 469 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 DLDP09622 509 aaKnown RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 HNRNPLP14866 589 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTSA-209ENST00000493522 IL12RB1P42701 662 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 CTSOP43234 321 aaPredicted RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 DGKEP52429 567 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 ZNF135P52742 658 aaPredicted RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 CDH6P55285 790 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 ST8SIA6P61647 398 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 GNA12Q03113 381 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 STARD3Q14849 445 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 DPYSL2Q16555 572 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 USP39Q53GS9 565 aaKnown RBP11.87□□□□□ -0.51
CTSA-209ENST00000493522 ARTNQ5T4W7 220 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 C11orf63Q6NUN7 778 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 RFX8Q6ZV50 586 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 OR7D4Q8NG98 312 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 FEM1AQ9BSK4 669 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 SPON2Q9BUD6 331 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 LACRTQ9GZZ8 138 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 PCDH18Q9HCL0 1135 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms