RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FGF13Q92913 245 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 SMARCD2Q92925 531 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ARHGEF2Q92974 986 aaKnown RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ASB16Q96NS5 453 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 PHACTR1Q9C0D0 580 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 IGSF9Q9P2J2 1179 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 IPO11Q9UI26 975 aaKnown RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ANAPC5Q9UJX4 755 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 COL4A3Q01955 1670 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 KCNK1O00180 336 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 CHADO15335 359 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 PEX11BO96011 259 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 RHOCP08134 193 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 LTBRP36941 435 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 IFNAR2P48551 515 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 CBLBQ13191 982 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 SEMA5AQ13591 1074 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 HNRNPDQ14103 355 aaKnown RBP14.47□□□□□ -0.09
VPS26A-205ENST00000489656 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 KCNJ11Q14654 390 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 CBX2Q14781 532 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-205ENST00000489656 ATAT1Q5SQI0 421 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 CES5AQ6NT32 575 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 KLHDC8BQ8IXV7 354 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 MREGQ8N565 214 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 NAT8LQ8N9F0 302 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 PRCCQ92733 491 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-205ENST00000489656 PABPC5Q96DU9 382 aaKnown RBP14.47□□□□□ -0.09
VPS26A-205ENST00000489656 MSLNLQ96KJ4 702 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 TEKT5Q96M29 485 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 RIPOR3Q96MK2 946 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 ZNF599Q96NL3 588 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 ACE2Q9BYF1 805 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-205ENST00000489656 MARK1Q9P0L2 795 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 MYLKQ15746 1914 aa14.47□□□□□ -0.09
VPS26A-205ENST00000489656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 SCAMP3O14828 347 aaKnown RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CACNG3O60359 315 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 PRAMEF11O60813 436 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 PENKP01210 267 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CYBBP04839 570 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FAM153BP0C7A2 387 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CCNB1P14635 433 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 TPSB2P20231 275 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 HOXD9P28356 352 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 MTHFRP42898 656 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 OXCT1P55809 520 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 ZBTB17Q13105 803 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 TPSAB1Q15661 275 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 PARP6Q2NL67 630 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FAM153CQ494X1 144 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FAM78AQ5JUQ0 283 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FYB2Q5VWT5 728 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 ITPRIPL1Q6GPH6 555 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 GET4Q7L5D6 327 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 ZCCHC9Q8N567 271 aaKnown RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 TEX26Q8N6G2 289 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 ZNF557Q8N988 423 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 OR52K2Q8NGK3 314 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 EXOC4Q96A65 974 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 E2F7Q96AV8 911 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 APOL5Q9BWW9 433 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FRMD8Q9BZ67 464 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 TXLNGYQ9BZA5 131 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 GBA3Q9H227 469 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 SP110Q9HB58 689 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 PDFQ9HBH1 243 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 ETNK1Q9HBU6 452 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 EIF2B3Q9NR50 452 aaKnown RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 RAB6BQ9NRW1 208 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CLDND1Q9NY35 253 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 SEPT10Q9P0V9 454 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 KLHL8Q9P2G9 620 aaPredicted RBP14.46□□□□□ -0.09
VPS26A-205ENST00000489656 FAM153AQ9UHL3 310 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CDH7Q9ULB5 785 aa14.46□□□□□ -0.09
VPS26A-205ENST00000489656 CXorf51AA0A1B0GTR3 108 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 H0Y626 953 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 KDELR3O43731 214 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 METTL18O95568 372 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 JCHAINP01591 159 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 ACVRL1P37023 503 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 HSPA9P38646 679 aaKnown RBP14.45□□□□□ -0.1
VPS26A-205ENST00000489656 BASP1P80723 227 aaKnown RBP14.45□□□□□ -0.1
VPS26A-205ENST00000489656 CDK16Q00536 496 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 DLX2Q07687 328 aaPredicted RBP14.45□□□□□ -0.1
VPS26A-205ENST00000489656 SLC12A1Q13621 1099 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 TMCO4Q5TGY1 634 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 CARNMT1Q8N4J0 409 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 MCUQ8NE86 351 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 FIBINQ8TAL6 211 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 DDI1Q8WTU0 396 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 IRF7Q92985 503 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 RSPRY1Q96DX4 576 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 PPP1R2P1Q96PQ5 205 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 SPHK2Q9NRA0 654 aa14.45□□□□□ -0.1
VPS26A-205ENST00000489656 OR51B4Q9Y5P0 310 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms