RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 DEPDC1Q5TB30 811 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 NAA16Q6N069 864 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 TMEM179Q6ZVK1 233 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 WDR53Q7Z5U6 358 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 ADGRD2Q7Z7M1 963 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 FAM177A1Q8N128 213 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 SUMF1Q8NBK3 374 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 PPP2R3CQ969Q6 453 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 MACROD1Q9BQ69 325 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 RTP3Q9BQQ7 232 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 SH2D4AQ9H788 454 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 DUSP22Q9NRW4 184 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 TYW1Q9NV66 732 aaKnown RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 GABBR1Q9UBS5 961 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 PNMA8BQ9ULN7 279 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 C2orf16Q68DN1 1984 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 LAMA5O15230 3695 aa5.32□□□□□ -1.56
BRCA1-217ENST00000487825 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-217ENST00000487825 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 MYH7P12883 1935 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 GREB1Q4ZG55 1949 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 ASB14A6NK59 587 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 H3BML4 177 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 MPHOSPH10O00566 681 aaKnown RBP5.31□□□□□ -1.56
BRCA1-217ENST00000487825 ONECUT2O95948 504 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 MYL3P08590 195 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 IL15P40933 162 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-217ENST00000487825 TIMM10P62072 90 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 CYP4F2P78329 520 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 SATB1Q01826 763 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 CNTN2Q02246 1040 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 KRT17Q04695 432 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 ICA1Q05084 483 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 MYO1EQ12965 1108 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 PTGISQ16647 500 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 DUSP28Q4G0W2 176 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 MTX3Q5HYI7 312 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 PRAMEF17Q5VTA0 474 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 ZNF66Q6ZN08 573 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 SESTD1Q86VW0 696 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 FBXO16Q8IX29 292 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-217ENST00000487825 SLC35G2Q8TBE7 412 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 TOP1MTQ969P6 601 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 ACO2Q99798 780 aaKnown RBP5.31□□□□□ -1.56
BRCA1-217ENST00000487825 SH2D3AQ9BRG2 576 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 CXorf36Q9H7Y0 433 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 FBXO40Q9UH90 709 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 SH2B3Q9UQQ2 575 aa5.31□□□□□ -1.56
BRCA1-217ENST00000487825 EMSYQ7Z589 1322 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 ADGRA3Q8IWK6 1321 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 A0A1W2PPL8 197 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 E2F8A0AVK6 867 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 CYSRT1A8MQ03 144 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 TISP43B9A030 160 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 CSPG5O95196 566 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 THP07101 528 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 PRR35P0CG20 571 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 CYP2D6P10635 497 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 KITP10721 976 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 SP100P23497 879 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-217ENST00000487825 LRPAP1P30533 357 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 PLCD1P51178 756 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 DYNLL1P63167 89 aaKnown RBP5.3□□□□□ -1.56
BRCA1-217ENST00000487825 ZIK1Q3SY52 487 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-217ENST00000487825 B3GNT9Q6UX72 402 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 PARS2Q7L3T8 475 aaKnown RBP5.3□□□□□ -1.56
BRCA1-217ENST00000487825 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 MPP5Q8N3R9 675 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 ZBTB34Q8NCN2 500 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 DBF4BQ8NFT6 615 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 ATP8B4Q8TF62 1192 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 SLF1Q9BQI6 1058 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 ZIM2Q9NZV7 527 aa5.3□□□□□ -1.56
BRCA1-217ENST00000487825 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-217ENST00000487825 AKAP13Q12802 2813 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 FREM2Q5SZK8 3169 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 RAD50Q92878 1312 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 FANCIQ9NVI1 1328 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 FSD2A1L4K1 749 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 C2CD4DB7Z1M9 353 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 TAF4O00268 1085 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 BTN3A1O00481 513 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 SLC30A4O14863 429 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 NPSP0C0P6 89 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 SP9P0CG40 484 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 DNAJB1P25685 340 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 NRIP1P48552 1158 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 CTBP1Q13363 440 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 LY6KQ17RY6 165 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 TRIM71Q2Q1W2 868 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 SLC44A4Q53GD3 710 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 FAM83BQ5T0W9 1011 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 LMBRD2Q68DH5 695 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 ZNF626Q68DY1 528 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms