RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 OR4N4Q8N0Y3 316 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 SLC25A41Q8N5S1 370 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 KDM1BQ8NB78 822 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 ADPRHL1Q8NDY3 354 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 IGSF21Q96ID5 467 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 FAR2Q96K12 515 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 ADAD1Q96M93 576 aaKnown RBP2.42□□□□□ -2.02
USP9X-208ENST00000487625 POLR3GLQ9BT43 218 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 POLDIP3Q9BY77 421 aaKnown RBP2.42□□□□□ -2.02
USP9X-208ENST00000487625 PCGF6Q9BYE7 350 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.42□□□□□ -2.02
USP9X-208ENST00000487625 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.42□□□□□ -2.02
USP9X-208ENST00000487625 ABHD16BQ9H3Z7 469 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 ZNF304Q9HCX3 659 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 SLC52A1Q9NWF4 448 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 TCEAL9Q9UHQ7 104 aa2.42□□□□□ -2.02
USP9X-208ENST00000487625 ARID4BQ4LE39 1312 aaPredicted RBP2.42□□□□□ -2.02
USP9X-208ENST00000487625 PNMA6EA0A0J9YXQ4 647 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 KCNJ18B7U540 433 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 CER1O95813 267 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 GLUD1P00367 558 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 ALDOAP04075 364 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 HARSP12081 509 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 CHRNB2P17787 502 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 ANOS1P23352 680 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 TNFSF8P32971 234 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 KRT9P35527 623 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 GLUD2P49448 558 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 FAM3BP58499 235 aaPredicted RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 RPL15P61313 204 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 ARL16Q0P5N6 197 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 DMP1Q13316 513 aaPredicted RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 GRM4Q14833 912 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 DUSP6Q16828 381 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 ALG10Q5BKT4 473 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 ARL13AQ5H913 290 aaPredicted RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 ALG10BQ5I7T1 473 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 DNTTIP2Q5QJE6 756 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 OTUD1Q5VV17 481 aaPredicted RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 DCAF12L2Q5VW00 463 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 ANKRD40Q6AI12 368 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 Q6ZSV7 163 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 SMC5Q8IY18 1101 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 APOLD1Q96LR9 279 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 TRMT61BQ9BVS5 477 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 FRMD8Q9BZ67 464 aaPredicted RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 SFXN1Q9H9B4 322 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 PNRC2Q9NPJ4 139 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 GEMIN8Q9NWZ8 242 aaKnown RBP2.41□□□□□ -2.02
USP9X-208ENST00000487625 TNFSF13BQ9Y275 285 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 DTNAQ9Y4J8 743 aa2.41□□□□□ -2.02
USP9X-208ENST00000487625 TRBV5-7A0A0A0MS05 114 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 NCK2O43639 380 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 ATF3P18847 181 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 ITGB8P26012 769 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 SLC16A2P36021 539 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 DSCR10P59022 87 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 ZP1P60852 638 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 RBM6P78332 1123 aaKnown RBP2.4□□□□□ -2.03
USP9X-208ENST00000487625 TLE3Q04726 772 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 ZBTB16Q05516 673 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 TRAF3Q13114 568 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 HNF4GQ14541 408 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 SLC35G1Q2M3R5 365 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 HIBCHQ6NVY1 386 aaPredicted RBP2.4□□□□□ -2.03
USP9X-208ENST00000487625 ZNF367Q7RTV3 350 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 CCDC25Q86WR0 208 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 FAM217AQ8IXS0 508 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 CLIP4Q8N3C7 705 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 TXLNBQ8N3L3 684 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 DUX3Q96PT4 197 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 UHRF2Q96PU4 802 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 PSMD1Q99460 953 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 B3GNT4Q9C0J1 378 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 MYH16Q9H6N6 1097 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 EPS8L2Q9H6S3 715 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 CATSPERBQ9H7T0 1116 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 RNF146Q9NTX7 359 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 TMEM248Q9NWD8 314 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 RAB21Q9UL25 225 aa2.4□□□□□ -2.03
USP9X-208ENST00000487625 TRPC5Q9UL62 973 aaPredicted RBP2.4□□□□□ -2.03
USP9X-208ENST00000487625 CYP3A7-CYP3A51PA0A087WV96 503 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 MCIDASD6RGH6 385 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 TPD52L2O43399 206 aaKnown RBP2.39□□□□□ -2.03
USP9X-208ENST00000487625 LIASO43766 372 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 RPP40O75818 363 aaKnown RBP2.39□□□□□ -2.03
USP9X-208ENST00000487625 EIF3JO75822 258 aaKnown RBP2.39□□□□□ -2.03
USP9X-208ENST00000487625 PARNO95453 639 aaKnown RBP2.39□□□□□ -2.03
USP9X-208ENST00000487625 LCKP06239 509 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 CYP3A4P08684 503 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 CYP3A7P24462 503 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 ADPRHP54922 357 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 TMPRSS3P57727 454 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 RHAGQ02094 409 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 DSC1Q08554 894 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 ARL13BQ3SXY8 428 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 SPINK14Q6IE38 97 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 C8orf82Q6P1X6 216 aaPredicted RBP2.39□□□□□ -2.03
USP9X-208ENST00000487625 TMEM71Q6P5X7 295 aa2.39□□□□□ -2.03
USP9X-208ENST00000487625 TRABD2AQ86V40 505 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms