RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SESN3P58005 492 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 ABCE1P61221 599 aaKnown RBP26.64■■□□□ 1.85
HLA-C-208ENST00000487245 UBAP2LQ14157 1087 aaKnown RBP26.64■■□□□ 1.85
HLA-C-208ENST00000487245 PRPSAP1Q14558 356 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 RIPOR1Q6ZS17 1223 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 PANX3Q96QZ0 392 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 PAAF1Q9BRP4 392 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 SNX15Q9NRS6 342 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 SLC7A8Q9UHI5 535 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 COL4A4P53420 1690 aaPredicted RBP26.63■■□□□ 1.85
HLA-C-208ENST00000487245 ZNF195O14628 629 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 MPOP05164 745 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 ERVK-10P10266 1014 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 RALBP11234 206 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 BDNFP23560 247 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 CD52P31358 61 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 HTR7P34969 479 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 CRHR2Q13324 411 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 TUSC3Q13454 348 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 TMCO4Q5TGY1 634 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 TAC4Q86UU9 113 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 NPWQ8N729 165 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.63■■□□□ 1.85
HLA-C-208ENST00000487245 RNF34Q969K3 372 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 PKMYT1Q99640 499 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 THTPAQ9BU02 230 aa26.63■■□□□ 1.85
HLA-C-208ENST00000487245 PIH1D1Q9NWS0 290 aaKnown RBP26.63■■□□□ 1.85
HLA-C-208ENST00000487245 SEPT4O43236 478 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 IDH3AP50213 366 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 FCGRTP55899 365 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 SREBF2Q12772 1141 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 MAVSQ7Z434 540 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 DNAAF3Q8N9W5 541 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 MAP3K7O43318 606 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 FKBP6O75344 327 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 LRIG2O94898 1065 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 CPA3P15088 417 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 PAX7P23759 505 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 AAGABQ6PD74 315 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 ADGRG6Q86SQ4 1221 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 CLEC14AQ86T13 490 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 DCLK2Q8N568 766 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 TEKT5Q96M29 485 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 AGAP3Q96P47 875 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 TSGA13Q96PP4 275 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 PCDHB12Q9Y5F1 795 aa26.62■■□□□ 1.85
HLA-C-208ENST00000487245 ZCWPW2A0A1B0GU75 182 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 SIN3BO75182 1162 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 POMCP01189 267 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 AMHP03971 560 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 CTGFP29279 349 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 CD68P34810 354 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-208ENST00000487245 CSE1LP55060 971 aaKnown RBP26.61■■□□□ 1.85
HLA-C-208ENST00000487245 TSPY1Q01534 308 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 PPM1JQ5JR12 505 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 BRMS1LQ5PSV4 323 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 DTX3LQ8TDB6 740 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 DQX1Q8TE96 717 aaKnown RBP26.61■■□□□ 1.85
HLA-C-208ENST00000487245 SPDL1Q96EA4 605 aa26.61■■□□□ 1.85
HLA-C-208ENST00000487245 A0A088AWK7 358 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 TMEM114B3SHH9 223 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 MGEA5O60502 916 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 ANPEPP15144 967 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 TYMPP19971 482 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 PRDX6P30041 224 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 BRCC3P46736 316 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 AP2B1P63010 937 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 ANKRD20A4Q4UJ75 823 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 OVOS1Q6IE37 1185 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 CD300LGQ6UXG3 332 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 SAPCD2Q86UD0 394 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 RSPH1Q8WYR4 309 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 TRIB2Q92519 343 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 ZNF669Q96BR6 464 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-208ENST00000487245 HAPLN3Q96S86 360 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 MCMBPQ9BTE3 642 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 RHOBTB2Q9BYZ6 727 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 PNPOQ9NVS9 261 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 ARHGEF38Q9NXL2 777 aa26.6■■□□□ 1.85
HLA-C-208ENST00000487245 H2AFYO75367 372 aaKnown RBP26.59■■□□□ 1.85
HLA-C-208ENST00000487245 IGLV3-25P01717 112 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 MXRA7P84157 204 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ATG14Q6ZNE5 492 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 LINC00523Q86TU6 105 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 SUSD3Q96L08 255 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 MLPHQ9BV36 600 aaPredicted RBP26.59■■□□□ 1.85
HLA-C-208ENST00000487245 IL22Q9GZX6 179 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 WASF2Q9Y6W5 498 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ARHGAP42A6NI28 874 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 CCNT2O60583 730 aaKnown RBP26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ADAMTS4O75173 837 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 NFKB1P19838 968 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ARRB2P32121 409 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 BTKQ06187 659 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ZBTB17Q13105 803 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 NAPEPLDQ6IQ20 393 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 CES3Q6UWW8 571 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 CTU1Q7Z7A3 348 aaKnown RBP26.59■■□□□ 1.85
HLA-C-208ENST00000487245 STRA8Q7Z7C7 330 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 KLHDC8BQ8IXV7 354 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms