RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	STARD13	Q9Y3M8	1113 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	KNL1	Q8NG31	2342 aa		13.46	□□□□□ -0.26
NR1H3-223	ENST00000486991	ASCC3	Q8N3C0	2202 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	HYAL3	O43820	417 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	CFI	P05156	583 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	CEACAM1	P13688	526 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	HOXB3	P14651	431 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	GABRG2	P18507	467 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	CSRP1	P21291	193 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	IL1R2	P27930	398 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	HOXD9	P28356	352 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	ADRA1B	P35368	520 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	DGKG	P49619	791 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	DNA2	P51530	1060 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SGSH	P51688	502 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM193A	P78312	1265 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC25A11	Q02978	314 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SMTNL2	Q2TAL5	461 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM133B	Q5BKY9	247 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	EFHC2	Q5JST6	749 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	KCNT1	Q5JUK3	1230 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	LYSMD4	Q5XG99	296 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	TXNRD3NB	Q6F5E7	133 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SYT12	Q8IV01	421 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	HSPH1	Q92598	858 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	NTAN1	Q96AB6	310 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SPACA7	Q96KW9	195 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SNRNP25	Q9BV90	132 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	GTPBP2	Q9BX10	602 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	NUSAP1	Q9BXS6	441 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC6A17	Q9H1V8	727 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	ANLN	Q9NQW6	1124 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	ARHGEF38	Q9NXL2	777 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	EVL	Q9UI08	416 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	FZD10	Q9ULW2	581 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC27A6	Q9Y2P4	619 aa		13.45	□□□□□ -0.26
NR1H3-223	ENST00000486991		A0A1W2PQF6	199 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	KCNU1	A8MYU2	1149 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	PSTPIP1	O43586	416 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	PAGE1	O75459	146 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	LATS1	O95835	1130 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	KRT7	P08729	469 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	RARA	P10276	462 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC6A4	P31645	630 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	MARCKSL1	P49006	195 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC11A2	P49281	568 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	RPL6	Q02878	288 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	GEN1	Q17RS7	908 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	ATP13A4	Q4VNC1	1196 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	BOLA3	Q53S33	107 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	ERMARD	Q5T6L9	678 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	MEI1	Q5TIA1	1274 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	NADSYN1	Q6IA69	706 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	UCMA	Q8WVF2	138 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	KRT35	Q92764	455 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	GATA6	Q92908	595 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	MYEOV	Q96EZ4	313 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	BTN2A3P	Q96KV6	586 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	C16orf45	Q96MC5	204 aa	Predicted RBP	13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	SIK2	Q9H0K1	926 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	DHX35	Q9H5Z1	703 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	KLHL11	Q9NVR0	708 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	XPO7	Q9UIA9	1087 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	PILRB	Q9UKJ0	227 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	KLK13	Q9UKR3	277 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	AP4E1	Q9UPM8	1137 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	SNX10	Q9Y5X0	201 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	RAD54B	Q9Y620	910 aa		13.44	□□□□□ -0.26
NR1H3-223	ENST00000486991	CCDC66	A2RUB6	948 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	MIF4GD	A9UHW6	222 aa	Known RBP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991		I6L893	689 aa	Predicted RBP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ENC1	O14682	589 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	NPC1	O15118	1278 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ACSL4	O60488	711 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	KRT1	P04264	644 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	HOXB2	P14652	356 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	CTNNA2	P26232	953 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	NTSR1	P30989	418 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	CTNNA1	P35221	906 aa	Known RBP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	GGCX	P38435	758 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	AIF1	P55008	147 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ENPP2	Q13822	863 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	RPS6KA1	Q15418	735 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	CA9	Q16790	459 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	MPPE1	Q53F39	396 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ODF2	Q5BJF6	829 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ADGRF1	Q5T601	910 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	LRRC38	Q5VT99	294 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	TMEM215	Q68D42	235 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC23A3	Q6PIS1	610 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	POLN	Q7Z5Q5	900 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	PIP4P1	Q86T03	277 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	PYROXD2	Q8N2H3	581 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	UBL4B	Q8N7F7	174 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	KDF1	Q8NAX2	398 aa	Predicted RBP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	WFDC5	Q8TCV5	224 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	TEKT4	Q8WW24	435 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms