RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 FRS2Q8WU20 508 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 CPA5Q8WXQ8 436 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 RPL10LQ96L21 214 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 TBCBQ99426 244 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 EIF3CQ99613 913 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 SELENOOQ9BVL4 669 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 METTL5Q9NRN9 209 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 ADAM22Q9P0K1 906 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 SLCO3A1Q9UIG8 710 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 SIK3Q9Y2K2 1263 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 LATO43561 262 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 PLRG1O43660 514 aaKnown RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 ADCY5O95622 1261 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 IGHV4-34P06331 123 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 CD38P28907 300 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 CTSOP43234 321 aaPredicted RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 STK19P49842 368 aaPredicted RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 FMO1Q01740 532 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 DLG2Q15700 870 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 OTUD1Q5VV17 481 aaPredicted RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 CIR1Q86X95 450 aaPredicted RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 STK40Q8N2I9 435 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 PCDH20Q8N6Y1 951 aaKnown RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 CASKIN2Q8WXE0 1202 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 NTAN1Q96AB6 310 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 ARHGEF26Q96DR7 871 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 IQCDQ96DY2 449 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 MYEOVQ96EZ4 313 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 ALG14Q96F25 216 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 VCPIP1Q96JH7 1222 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 CFAP57Q96MR6 1250 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 FAM129BQ96TA1 746 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 OSBPL2Q9H1P3 480 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 NEUROG2Q9H2A3 272 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 ERVMER34-1Q9H9K5 563 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 SEPT11Q9NVA2 429 aaKnown RBP11.73□□□□□ -0.53
CCM2-213ENST00000480658 OR12D3Q9UGF7 316 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 PCOLCE2Q9UKZ9 415 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 PPM1HQ9ULR3 514 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 OR51B4Q9Y5P0 310 aa11.73□□□□□ -0.53
CCM2-213ENST00000480658 NYNRINQ9P2P1 1898 aaKnown RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 LAMA1P25391 3075 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3DA0A087WVF3 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3IA0A087WXS9 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3EA0A087X179 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3KA0A087X1G2 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 A0A1B0GVT2 93 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3FA6NER0 549 aaPredicted RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 C2CD4BA6NLJ0 364 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3LB9A6J9 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 GIPC1O14908 333 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 SRGAP2O75044 1071 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 PROS1P07225 676 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3HP0C7X1 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 UNGP13051 313 aaPredicted RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 RHOQP17081 205 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 CTSKP43235 329 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 CSNK1EP49674 416 aaKnown RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 SERPINH1P50454 418 aaKnown RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 ZNF135P52742 658 aaPredicted RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 TYRO3Q06418 890 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 SCAPQ12770 1279 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 POLD3Q15054 466 aaPredicted RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 CLEC16AQ2KHT3 1053 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 KIF19Q2TAC6 998 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3GQ6DHY5 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3CQ6IPX1 549 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 UNQ6494/PRO21346Q6UXR6 183 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 DBX2Q6ZNG2 339 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D3Q8IZP1 549 aaPredicted RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 AADATQ8N5Z0 425 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 MFSD2AQ8NA29 543 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 PIP4K2CQ8TBX8 421 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 ADAMTS14Q8WXS8 1223 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 ISG20Q96AZ6 181 aaKnown RBP11.72□□□□□ -0.53
CCM2-213ENST00000480658 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 SERAC1Q96JX3 654 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 C11orf70Q9BRQ4 267 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 OSBPL1AQ9BXW6 950 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 ATP13A1Q9HD20 1204 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 IL36AQ9UHA7 158 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 MSRB2Q9Y3D2 182 aa11.72□□□□□ -0.53
CCM2-213ENST00000480658 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 FAM221BA6H8Z2 402 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms