RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FAM90A12PA8MX19 464 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FAM90A23PA8MXZ1 464 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 SNAP23O00161 211 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 GRM8O00222 908 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF213O14771 459 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 PER2O15055 1255 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TBX10O75333 385 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 GOSR1O95249 250 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 RB1P06400 928 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FESP07332 822 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 MYBL1P10243 752 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 LYL1P12980 280 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 NR4A1P22736 598 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 ZFP36P26651 326 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TLX1P31314 330 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 BUD31P41223 144 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 RPL15P61313 204 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 OLR1P78380 273 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 EFNB1P98172 346 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TP53BP2Q13625 1128 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 IRF3Q14653 427 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF674Q2M3X9 581 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 NRN1LQ496H8 165 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TTC31Q49AM3 519 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 AASDHQ4L235 1098 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TIGD2Q4W5G0 525 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 ADALQ6DHV7 355 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 VWA1Q6PCB0 445 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 DENND5BQ6ZUT9 1274 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 SDCCAG8Q86SQ7 713 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 NAT8LQ8N9F0 302 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 MAFAQ8NHW3 353 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 SLC25A43Q8WUT9 341 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FUBP1Q96AE4 644 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 RSPRY1Q96DX4 576 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 MYEOVQ96EZ4 313 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 WDYHV1Q96HA8 205 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 CCDC43Q96MW1 224 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 GCNAQ96QF7 691 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 THUMPD3Q9BV44 507 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 SLC32A1Q9H598 525 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 OPA3Q9H6K4 179 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 PFDN4Q9NQP4 134 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 RRP7BPQ9NSQ0 103 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 DECR2Q9NUI1 292 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 IL1RAPL1Q9NZN1 696 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 CCNL1Q9UK58 526 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 MKLN1Q9UL63 735 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 PPIEQ9UNP9 301 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 ADGRA2Q96PE1 1338 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FRMD3A2A2Y4 597 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 A8MXE2 369 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 BTBD18B2RXH4 712 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TP73O15350 636 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 NKX2-8O15522 239 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PROM1O43490 865 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 LPXNO60711 386 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 MT-ND3P03897 115 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 IL6RP08887 468 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 FAM200BP0CF97 657 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CREB1P16220 341 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 IFNAR1P17181 557 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CDH2P19022 906 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 GKP32189 559 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CXCR5P32302 372 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 HSD17B4P51659 736 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PDE1AP54750 535 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TPTEP56180 551 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TAS2R50P59544 299 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CDK18Q07002 472 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 FRG1Q14331 258 aaKnown RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 KCNJ12Q14500 433 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 E2F5Q15329 346 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 ADIPOQQ15848 244 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 C9orf152Q5JTZ5 239 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 KRBOX4Q5JUW0 171 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 GKAP1Q5VSY0 366 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 GRHL2Q6ISB3 625 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PLBD1Q6P4A8 553 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CATSPER4Q7RTX7 472 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 GALNT7Q86SF2 657 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 METTL23Q86XA0 190 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 C1orf210Q8IVY1 113 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CCAR2Q8N163 923 aaKnown RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TRIML1Q8N9V2 468 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CADM4Q8NFZ8 388 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 MOSPD2Q8NHP6 518 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PIGOQ8TEQ8 1089 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 CLEC4CQ8WTT0 213 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PRPF31Q8WWY3 499 aaKnown RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 MRPS27Q92552 414 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms