RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 LRRC34Q8IZ02 419 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 IFNL2Q8IZJ0 200 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TSPYL6Q8N831 410 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 DNAAF3Q8N9W5 541 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ADAMTS16Q8TE57 1224 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GRAMD1AQ96CP6 724 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF486Q96H40 463 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF641Q96N77 438 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 MMS19Q96T76 1030 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TBCBQ99426 244 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 PIP5K1AQ99755 562 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 C7orf25Q9BPX7 421 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 MLPHQ9BV36 600 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TDRD1Q9BXT4 1180 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF717Q9BY31 904 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TMEM245Q9H330 911 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GHITMQ9H3K2 345 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 SLITRK6Q9H5Y7 841 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 LRRC19Q9H756 370 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 KCNK13Q9HB14 408 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 PTPRHQ9HD43 1115 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RRN3Q9NYV6 651 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 NCKIPSDQ9NZQ3 722 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ANKMY1Q9P2S6 941 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 PPARGC1AQ9UBK2 798 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GTF2IRD1Q9UHL9 959 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RCOR1Q9UKL0 485 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 FAM50BQ9Y247 325 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 BACE2Q9Y5Z0 518 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ARHGEF10O15013 1369 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 NEXMIFQ5QGS0 1516 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 FLT1P17948 1338 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PITPNM2Q9BZ72 1349 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 A0A0U1RQJ8 604 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CCDC160A6NGH7 325 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC9B1P1A6NJY1 282 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 C16orf96A6NNT2 1141 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 A8MXQ7 604 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 K7EPI3 171 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF701M0R085 212 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 AURKAO14965 403 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 POLR2DO15514 142 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA12O60330 932 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 TOM1L1O75674 476 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SERPINI2O75830 405 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SULT1C4O75897 302 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 USP1O94782 785 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CCNDBP1O95273 360 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CFBP00751 764 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ASGR2P07307 311 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PLS3P13797 630 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 POU2F1P14859 743 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 IFNGR1P15260 489 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PDE6AP16499 860 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 JAK1P23458 1154 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PSMA2P25787 234 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 MARK3P27448 753 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 LTBRP36941 435 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PHKA1P46020 1223 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 STARP49675 285 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 COPB1P53618 953 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 HADHBP55084 474 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 EIF3BP55884 814 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 AP1S2P56377 157 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 C21orf59P57076 290 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CYP4F8P98187 520 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ZBTB16Q05516 673 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 C2orf54Q08AI8 447 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 MED21Q13503 144 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 GIT2Q14161 759 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 GALEQ14376 348 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 NCF4Q15080 339 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 FAM76BQ5HYJ3 339 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 KRBOX4Q5JUW0 171 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 AGAP7PQ5VUJ5 663 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 BROXQ5VW32 411 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SHQ1Q6PI26 577 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 GSTA5Q7RTV2 222 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 HDDC2Q7Z4H3 204 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 TSPYL5Q86VY4 417 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 DNAAF5Q86Y56 855 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 FAM109AQ8N4B1 249 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 KIF2BQ8N4N8 673 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 LRRC71Q8N4P6 559 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SIMC1Q8NDZ2 872 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 TGFBRAP1Q8WUH2 860 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ATXN2LQ8WWM7 1075 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 STMN2Q93045 179 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 OMA1Q96E52 524 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 BBS4Q96RK4 519 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ECSITQ9BQ95 431 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ZPBPQ9BS86 351 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 TUBB6Q9BUF5 446 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PABPC3Q9H361 631 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ACSS3Q9H6R3 686 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms