RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 PIN4Q9Y237 131 aaKnown RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 C2P06681 752 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 CSRP3P50461 194 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 AFF1P51825 1210 aaKnown RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 DEUP1Q05D60 604 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 NAB1Q13506 487 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SPANXN3Q5MJ09 141 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 GRTP1Q5TC63 336 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 C6orf163Q5TEZ5 329 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 WSCD1Q658N2 575 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SLC7A14Q8TBB6 771 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 WNT8BQ93098 351 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 LENG8Q96PV6 779 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SLC2A13Q96QE2 648 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 GATA5Q9BWX5 397 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 TRIM4Q9C037 500 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 SUDS3Q9H7L9 328 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 CASS4Q9NQ75 786 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 FKBP6O75344 327 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 FAM163BP0C2L3 166 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 COX4I1P13073 169 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 CYP2B6P20813 491 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 MPSTP25325 297 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NMBRP28336 390 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ADRA1BP35368 520 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 TAF6P49848 677 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 TKTL1P51854 596 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 TBL3Q12788 808 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 DLG1Q12959 904 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 KLF10Q13118 480 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 HNRNPDQ14103 355 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 GSTA3Q16772 222 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 FAM219BQ5XKK7 198 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ADGRG6Q86SQ4 1221 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 RBM12BQ8IXT5 1001 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 URGCPQ8TCY9 931 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 DNAJB3Q8WWF6 145 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 DPF3Q92784 378 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NR1H4Q96RI1 486 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 PTGESO14684 152 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NFKB1P19838 968 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 MX2P20592 715 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 GLDCP23378 1020 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 GABRB3P28472 473 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 MSX2P35548 267 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 SERPINB5P36952 375 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 GRIA2P42262 883 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NUMBP49757 651 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 SERPINB8P50452 374 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ZNF460Q14592 562 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 CCDC153Q494R4 210 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 DUSP28Q4G0W2 176 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 XKR4Q5GH76 650 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 FBXL19Q6PCT2 694 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 AAGABQ6PD74 315 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 SMG8Q8ND04 991 aaKnown RBP11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ZMIZ2Q8NF64 920 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 VPS39Q96JC1 886 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 C1QTNF1Q9BXJ1 281 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 RHOBTB2Q9BYZ6 727 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 LRRC40Q9H9A6 602 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
C9orf3-214ENST00000473778 NRCAMQ92823 1304 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 A0A1B0GVG6 124 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 NEMP1O14524 444 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 PHGDHO43175 533 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 HSPA4LO95757 839 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 RAG1P15918 1043 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 PTPN1P18031 435 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 EPHA3P29320 983 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 GLRBP48167 497 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 MTTPP55157 894 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 GRM3Q14832 879 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 SNX17Q15036 470 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 TMEM198Q66K66 360 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 BHLHA9Q7RTU4 235 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms