RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TPX2Q9ULW0 747 aaKnown RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 CHD7Q9P2D1 2997 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 KDELR3O43731 214 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 MAFKO60675 156 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ECI2O75521 394 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 JCHAINP01591 159 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ZSCAN5DPP0CG00 497 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 TYRP14679 529 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ETS1P14921 441 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 PSMC3P17980 439 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 HOXD9P28356 352 aaPredicted RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 TNFRSF8P28908 595 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 RPL22P35268 128 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 LTBRP36941 435 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ACVRL1P37023 503 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 RPL21P46778 160 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 PLTPP55058 493 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 GDF10P55107 478 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 VSNL1P62760 191 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 HNRNPDQ14103 355 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 RFTN1Q14699 578 aaPredicted RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 DHCR24Q15392 516 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 PARP6Q2NL67 630 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 TEX44Q53QW1 395 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ANKRD20A2Q5SQ80 823 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ANKRD20A1Q5TYW2 823 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ANKRD20A3Q5VUR7 823 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 TANGO2Q6ICL3 276 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 PPP1R21Q6ZMI0 780 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 TMEM25Q86YD3 366 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 MFSD6LQ8IWD5 586 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 TP53INP2Q8IXH6 220 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 PPIL6Q8IXY8 311 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ADGRG2Q8IZP9 1017 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 DCAF4L2Q8NA75 395 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 FIBINQ8TAL6 211 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 LRRN4Q8WUT4 740 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 ARHGEF2Q92974 986 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 FATE1Q969F0 183 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 MYEOVQ96EZ4 313 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 AGAP3Q96P47 875 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 PNKPQ96T60 521 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 TRMT61BQ9BVS5 477 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 CINPQ9BW66 212 aaPredicted RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 SLC2A11Q9BYW1 496 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 LINC00597Q9H2U6 94 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 RBM22Q9NW64 420 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCM2-204ENST00000470837 MARK1Q9P0L2 795 aa9.97□□□□□ -0.81
CCM2-204ENST00000470837 UBA2Q9UBT2 640 aaPredicted RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 MTCL1Q9Y4B5 1905 aaKnown RBP9.97□□□□□ -0.81
CCM2-204ENST00000470837 TNRC18O15417 2968 aaPredicted RBP9.96□□□□□ -0.81
CCM2-204ENST00000470837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 A0A0D9SEW6 157 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CCDC151A5D8V7 595 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 GFRA2O00451 464 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 DNALI1O14645 258 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 PSMD3O43242 534 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 PRAMEF11O60813 436 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SEC31AO94979 1220 aaKnown RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 PENKP01210 267 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 APRTP07741 180 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 VAV1P15498 845 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 PTPN3P26045 913 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 NNMTP40261 264 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CSKP41240 450 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 MMP13P45452 471 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ITGA8P53708 1063 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 IFI35P80217 286 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 SULT2A1Q06520 285 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 DMC1Q14565 340 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 MORF4L2Q15014 288 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 EML3Q32P44 896 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 FYB2Q5VWT5 728 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CXorf57Q6NSI4 855 aaKnown RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 CCNI2Q6ZMN8 369 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 Q7L0L9 218 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 HOOK3Q86VS8 718 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ZNF567Q8N184 647 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 TAB3Q8N5C8 712 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 OR7D4Q8NG98 312 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CSGALNACT1Q8TDX6 532 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 USP33Q8TEY7 942 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CASKIN2Q8WXE0 1202 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ACDQ96AP0 544 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 FMO2Q99518 471 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 KXD1Q9BQD3 176 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 FEM1AQ9BSK4 669 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 CEP41Q9BYV8 373 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 FRMD8Q9BZ67 464 aaPredicted RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 FOXP3Q9BZS1 431 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 EBF3Q9H4W6 596 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 NOL6Q9H6R4 1146 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms