RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 PDIK1LQ8N165 341 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ATPAF2Q8N5M1 289 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RTL3Q8N8U3 475 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 KREMEN2Q8NCW0 462 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 EXOC4Q96A65 974 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 GDAP1L1Q96MZ0 367 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 SPATA13Q96N96 652 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 NEUROG2Q9H2A3 272 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 PABPC3Q9H361 631 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 CCSER2Q9H7U1 834 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TLE6Q9H808 572 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ASAH2Q9NR71 780 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ZMYM5Q9UJ78 669 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 LSM7Q9UK45 103 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 NUDT5Q9UKK9 219 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TRHDEQ9UKU6 1024 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 SORCS3Q9UPU3 1222 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 HS3ST4Q9Y661 456 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ZFHX4Q86UP3 3567 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 IGLV3-10A0A075B6K4 115 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 MED19A0JLT2 244 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 C2orf71A6NGG8 1288 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ARHGAP42A6NI28 874 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ERI2A8K979 691 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA8KD6RF30 607 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 E7EVH7 732 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 FAM72CH0Y354 149 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 RNF103O00237 685 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 PSMD3O43242 534 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 XYLBO75191 536 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 SASH3O75995 380 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 NEBLO76041 1014 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 OAS1P00973 400 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 HNRNPA1P09651 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS50-207ENST00000458530 NUDT17P0C025 328 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 TSHRP16473 764 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 HOXB8P17481 243 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 TPSB2P20231 275 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 DDX6P26196 483 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS50-207ENST00000458530 HSD17B3P37058 310 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 GARSP41250 739 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 MAPKAPK2P49137 400 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 LMAN1P49257 510 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 CLCN5P51795 746 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 NDST2P52849 883 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 GDF10P55107 478 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ERVFC1P60507 584 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 TPSAB1Q15661 275 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ARHGAP15Q53QZ3 475 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 DNAJC21Q5F1R6 531 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 MS4A13Q5J8X5 152 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 FAM72AQ5TYM5 149 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 PIK3R6Q5UE93 754 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 FAM72DQ6L9T8 149 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 LILRA6Q6PI73 481 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 FAM72BQ86X60 149 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 CCDC13Q8IYE1 715 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 MRPL43Q8N983 215 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 MICAL1Q8TDZ2 1067 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 NSMCE1Q8WV22 266 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 PRCCQ92733 491 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 RPRD1AQ96P16 312 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS50-207ENST00000458530 CCDC77Q9BR77 488 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 TXLNGYQ9BZA5 131 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 STMN4Q9H169 189 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 PPCSQ9HAB8 311 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ANLNQ9NQW6 1124 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 EIF2B3Q9NR50 452 aaKnown RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 RAB6BQ9NRW1 208 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ETNK2Q9NVF9 386 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 TMEM248Q9NWD8 314 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 ZNF510Q9Y2H8 683 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 NUP210Q8TEM1 1887 aaPredicted RBP9.16□□□□□ -0.94
VPS50-207ENST00000458530 MYO10Q9HD67 2058 aa9.16□□□□□ -0.94
VPS50-207ENST00000458530 SPTBN2O15020 2390 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 TRAV19A0A0A6YYK7 116 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 I6L893 689 aaPredicted RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 AP3B1O00203 1094 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 PER2O15055 1255 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 COCHO43405 550 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 RRP9O43818 475 aaKnown RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 ACSL4O60488 711 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 SPAG6O75602 509 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 CSPG5O95196 566 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 HMBSP08397 361 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 ABHD2P08910 425 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 POU2F2P09086 479 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 MYZAPP0CAP1 466 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 ZSCAN5DPP0CG00 497 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 MBL2P11226 248 aaPredicted RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 ETS1P14921 441 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 TACR2P21452 398 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms