RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 MARCH8Q5T0T0 291 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RBM20Q5T481 1227 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ERAP2Q6P179 960 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 WDR59Q6PJI9 974 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ZPBP2Q6X784 338 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 MACC1Q6ZN28 852 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RTL10Q7L3V2 364 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 GSTA5Q7RTV2 222 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 SLC44A2Q8IWA5 706 aaPredicted RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 UNC45BQ8IWX7 931 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FBXL6Q8N531 539 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CAMKK1Q8N5S9 505 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TRPV1Q8NER1 839 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TRAPPC12Q8WVT3 735 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TRIB2Q92519 343 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RBM18Q96H35 190 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 DNAJC1Q96KC8 554 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 MFSD14AQ96MC6 490 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 WACQ9BTA9 647 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TBC1D10AQ9BXI6 508 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HOXD1Q9GZZ0 328 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 UPF3AQ9H1J1 476 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 GANQ9H2C0 597 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 Q9H521 79 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ATP13A1Q9HD20 1204 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 AGPAT5Q9NUQ2 364 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 EHD3Q9NZN3 535 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CEP72Q9P209 647 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PDCD11Q14690 1871 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TRIP11Q15643 1979 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 A0A0U1RQJ8 604 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 MBLAC1A4D2B0 266 aaPredicted RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 LRRIQ4A6NIV6 560 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 K7EPI3 171 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PSMD9O00233 223 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PDE2AO00408 941 aaPredicted RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 E2F3O00716 465 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CAPN9O14815 690 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HNRNPDLO14979 420 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 MTSS1O43312 755 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ITM2AO43736 263 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 NUAK1O60285 661 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FAM189A1O60320 539 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 DUSP11O75319 330 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FKBP6O75344 327 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CDK14O94921 469 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 NPPAP01160 153 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CD48P09326 243 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 SMIM18P0DKX4 95 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 AKR1A1P14550 325 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ALAS2P22557 587 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PROZP22891 400 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HTR7P34969 479 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HSD17B3P37058 310 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TALDO1P37837 337 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 GP5P40197 560 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 GRIA2P42262 883 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FMO5P49326 533 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FLT3LGP49771 235 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RAP1GDS1P52306 607 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PTENP60484 403 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CLDN10P78369 228 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RHAGQ02094 409 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 SP3Q02447 781 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FOLH1Q04609 750 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 APOFQ13790 326 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 GALNT3Q14435 633 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 EFTUD2Q15029 972 aaKnown RBP eCLIP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FAM187BQ17R55 369 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 SMU1Q2TAY7 513 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TBRG1Q3YBR2 411 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ANKRD20A4Q4UJ75 823 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PGM2L1Q6PCE3 622 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 UGT2A3Q6UWM9 527 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 BNIPLQ7Z465 357 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HPS6Q86YV9 775 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TMEM126BQ8IUX1 230 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 KIF2BQ8N4N8 673 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 LRRC71Q8N4P6 559 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 CCNYL1Q8N7R7 359 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 C7orf57Q8NEG2 295 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ZSWIM2Q8NEG5 633 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 OR6S1Q8NH40 331 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 SYN2Q92777 582 aaPredicted RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RELTQ969Z4 430 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 PDXPQ96GD0 296 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TOE1Q96GM8 510 aaKnown RBP6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 TWNKQ96RR1 684 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 KRT12Q99456 494 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ZBED2Q9BTP6 218 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 ACAT2Q9BWD1 397 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 BTBD2Q9BX70 525 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 HAPLN2Q9GZV7 340 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 C2orf40Q9H1Z8 148 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 LHX5Q9H2C1 402 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 FZD8Q9H461 694 aa6.97□□□□□ -1.29
CUBNP3-201ENST00000457461 RMND5AQ9H871 391 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms