RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 PBX4Q9BYU1 374 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 PLAC1Q9HBJ0 212 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 S100A14Q9HCY8 104 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 VCX3AQ9NNX9 186 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 MARCH5Q9NX47 278 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 GDAP2Q9NXN4 497 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 NDUFA13Q9P0J0 144 aa13.58□□□□□ -0.24
LINC00343-203ENST00000454555 RCOR3Q9P2K3 495 aaPredicted RBP13.58□□□□□ -0.24
LINC00343-203ENST00000454555 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
LINC00343-203ENST00000454555 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.58□□□□□ -0.24
LINC00343-203ENST00000454555 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 PRR5-ARHGAP8B1AHC4 643 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 SPTLC1O15269 473 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 H2AFYO75367 372 aaKnown RBP13.57□□□□□ -0.24
LINC00343-203ENST00000454555 EFEMP2O95967 443 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 MYOGP15173 224 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 IGFBP6P24592 240 aaPredicted RBP13.57□□□□□ -0.24
LINC00343-203ENST00000454555 L1CAMP32004 1257 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 CPOXP36551 454 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 PTPN9P43378 593 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 ARHGAP8P85298 464 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 DEUP1Q05D60 604 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 KDSRQ06136 332 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 ASPHQ12797 758 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 DPYSL2Q16555 572 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 CCDC14Q49A88 953 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 FSCBQ5H9T9 825 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 PCDH19Q8TAB3 1148 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 ACTRT2Q8TDY3 377 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 FAM172AQ8WUF8 416 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 SREK1Q8WXA9 508 aaKnown RBP13.57□□□□□ -0.24
LINC00343-203ENST00000454555 DTNBP1Q96EV8 351 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 IGSF21Q96ID5 467 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 NT5C1AQ9BXI3 368 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 MSRAQ9UJ68 235 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 ADAM28Q9UKQ2 775 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 PCDHB12Q9Y5F1 795 aa13.57□□□□□ -0.24
LINC00343-203ENST00000454555 TNRC18O15417 2968 aaPredicted RBP13.57□□□□□ -0.24
LINC00343-203ENST00000454555 C2orf71A6NGG8 1288 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 M0QZQ0 153 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 PEX1O43933 1283 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 TADA2AO75478 443 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 CA3P07451 260 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 PPM1AP35813 382 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 BMPR1AP36894 532 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 GARSP41250 739 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 CPA2P48052 419 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SLC1A6P48664 564 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 HK2P52789 917 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SMAD3P84022 425 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SLC6A3Q01959 620 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 CDC16Q13042 620 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 RABGAP1LQ5R372 815 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 THEMIS2Q5TEJ8 643 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 METTL21CQ5VZV1 264 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 OLFML1Q6UWY5 402 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 ZNF534Q76KX8 674 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 DPH6Q7L8W6 267 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 PSTKQ8IV42 348 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 NCSTNQ92542 709 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 SPG21Q9NZD8 308 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 YBX2Q9Y2T7 364 aaKnown RBP13.56□□□□□ -0.24
LINC00343-203ENST00000454555 HEY1Q9Y5J3 304 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 MAD1L1Q9Y6D9 718 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 WASF2Q9Y6W5 498 aa13.56□□□□□ -0.24
LINC00343-203ENST00000454555 A0A088AWK7 358 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 NT5C1B-RDH14C9J2C7 533 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 F8W810 466 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ITGB1P05556 798 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 RB1P06400 928 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 MX2P20592 715 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PBX2P40425 430 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PBX3P40426 434 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 CDH8P55286 799 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 NIPAL4Q0D2K0 466 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TUBB3Q13509 450 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 LRIT3Q3SXY7 679 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TIGD5Q53EQ6 642 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PGM2L1Q6PCE3 622 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 LIMS2Q7Z4I7 341 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms