RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SEC63Q9UGP8 760 aaKnown RBP5.57□□□□□ -1.52
SBDSP1-204ENST00000453858 DAAM1Q9Y4D1 1078 aa5.57□□□□□ -1.52
SBDSP1-204ENST00000453858 FHOD1Q9Y613 1164 aa5.57□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF106Q9H2Y7 1883 aaKnown RBP5.57□□□□□ -1.52
SBDSP1-204ENST00000453858 CNTRLQ7Z7A1 2325 aa5.57□□□□□ -1.52
SBDSP1-204ENST00000453858 HRNRQ86YZ3 2850 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PRAMEF33A0A0G2JMD5 474 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 EFCAB7A8K855 629 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PRSS44E7EML9 344 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 AGRPO00253 132 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 NTN3O00634 580 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PRAMEF10O60809 474 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TP53P04637 393 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 CSH1P0DML2 217 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 CSH2P0DML3 217 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 LIFP15018 202 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 BPIP17213 487 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TYMPP19971 482 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 HSPA4P34932 840 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 ADCY7P51828 1080 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TAF12Q16514 161 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 SLC39A12Q504Y0 691 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 ZRANB3Q5FWF4 1079 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 SDHAF4Q5VUM1 108 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 CDKAL1Q5VV42 579 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TMEM198Q66K66 360 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 KIAA0895LQ68EN5 471 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 CDCA2Q69YH5 1023 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 WWC2Q6AWC2 1192 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 C6orf15Q6UXA7 325 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 RAB11FIP2Q7L804 512 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 B3GNT8Q7Z7M8 397 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TSPYL5Q86VY4 417 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PLD6Q8N2A8 252 aaKnown RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 RCC1LQ96I51 464 aaKnown RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 RANBP9Q96S59 729 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 LZTS2Q9BRK4 669 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 KRT23Q9C075 422 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PRDM14Q9GZV8 571 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 KLHL25Q9H0H3 589 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 GP6Q9HCN6 339 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 PRMT7Q9NVM4 692 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 THAP10Q9P2Z0 257 aaPredicted RBP5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 TCEAL9Q9UHQ7 104 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 KCND3Q9UK17 655 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 FBXO10Q9UK96 956 aa5.56□□□□□ -1.52
SBDSP1-204ENST00000453858 EME2A4GXA9 379 aaPredicted RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 CACNG3O60359 315 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 GAS7O60861 476 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 GSNP06396 782 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ACADMP11310 421 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 PFKLP17858 780 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ART1P52961 327 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 RNASE9P60153 205 aaKnown RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 EIF3IQ13347 325 aaKnown RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ADAM9Q13443 819 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 TFDP1Q14186 410 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 NT5DC1Q5TFE4 455 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 LRCH2Q5VUJ6 765 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 TDRD10Q5VZ19 366 aaKnown RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ZKSCAN2Q63HK3 967 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ARMCX5Q6P1M9 558 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 POMZP3Q6PJE2 187 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 Q71RC1 249 aaPredicted RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 MIER3Q7Z3K6 550 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 JAMLQ86YT9 394 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 PHC2Q8IXK0 858 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 NAGSQ8N159 534 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 CELF2-AS1Q8N7Q2 184 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 Q8NA96 180 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 IGDCC4Q8TDY8 1250 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 C2orf15Q8WU43 125 aaKnown RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 UBE2FQ969M7 185 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SMR3AQ99954 134 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 BTBD1Q9H0C5 482 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SPHK2Q9NRA0 654 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SEMA3GQ9NS98 782 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 TMLHEQ9NVH6 421 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ADAM21Q9UKJ8 722 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 PCDHB10Q9UN67 800 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 MAGED2Q9UNF1 606 aaPredicted RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF281Q9Y2X9 895 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SF3B6Q9Y3B4 125 aaKnown RBP5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 SNX14Q9Y5W7 946 aa5.55□□□□□ -1.52
SBDSP1-204ENST00000453858 HIVEP2P31629 2446 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 H3BS24 57 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 K7ESM1 405 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ACKR2O00590 384 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 PDPK1O15530 556 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 DUX1O43812 170 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SUSD5O60279 629 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ITGB3P05106 788 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 EPHX1P07099 455 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 PRKCHP24723 683 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 TPP2P29144 1249 aaPredicted RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 OAS2P29728 719 aaKnown RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 LRPAP1P30533 357 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms