RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ZNF568Q3ZCX4 644 aa6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 Q6ZPB1 254 aaPredicted RBP6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 LRRTM3Q86VH5 581 aa6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 SPATA2LQ8IUW3 424 aaPredicted RBP6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 ZFAND2BQ8WV99 257 aa6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 ZNF560Q96MR9 790 aa6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 MMTAG2Q9BU76 263 aaKnown RBP6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
BRAFP1-201ENST00000445336 RP1L1Q8IWN7 2480 aaPredicted RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 TCHHQ07283 1943 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 PHACTR2O75167 634 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CYBBP04839 570 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ATP5BP06576 529 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZDHHC11BP0C7U3 371 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 LHX1P48742 406 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 TAF6P49848 677 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 SNTB1Q13884 538 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 FZD2Q14332 565 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 NAPRTQ6XQN6 538 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 SLC47A2Q86VL8 602 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 FAM217AQ8IXS0 508 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZADH2Q8N4Q0 377 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZNF579Q8NAF0 562 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 GPR156Q8NFN8 814 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CCDC148Q8NFR7 591 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 IGDCC4Q8TDY8 1250 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 PPP4R1Q8TF05 950 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CCDC43Q96MW1 224 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 IP6K3Q96PC2 410 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 IKZF4Q9H2S9 585 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZBTB40Q9NUA8 1239 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 GPR83Q9NYM4 423 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 IL37Q9NZH6 218 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 RBM19Q9Y4C8 960 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 TTC26A0AVF1 554 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CCL21O00585 134 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 NUDT21O43809 227 aaKnown RBP6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ZWINTO95229 277 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 MUTP22033 750 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CERCAMQ5T4B2 595 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 FAM171BQ6P995 826 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 PAQR7Q86WK9 346 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 BCORP1Q8N888 145 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 KIAA0895Q8NCT3 520 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 NCOA7Q8NI08 942 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 ASB5Q8WWX0 329 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 IFT74Q96LB3 600 aa6.61□□□□□ -1.35
BRAFP1-201ENST00000445336 CTAG2O75638 210 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 KIF20AO95235 890 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 BLKP51451 505 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 TDGF1P3P51864 188 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 B4GALNT1Q00973 533 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 PPP2R3AQ06190 1150 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 ENOX2Q16206 610 aaKnown RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 CPSF7Q8N684 471 aaKnown RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 OTUD7AQ8TE49 926 aaPredicted RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 KIFAP3Q92845 792 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 CDK5RAP1Q96SZ6 601 aaKnown RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 WDR77Q9BQA1 342 aaPredicted RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 NKX1-2Q9UD57 310 aaPredicted RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 TUBGCP4Q9UGJ1 667 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 MTMR6Q9Y217 621 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 NTNG1Q9Y2I2 539 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 RYR3Q15413 4870 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 PKDREJQ9NTG1 2253 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 A0A0D9SFI3 127 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 FAM92AA1XBS5 289 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 CYB561D2O14569 222 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 PLEKHA8P1O95397 391 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 SRPRAP08240 638 aaKnown RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 RARRES1P49788 294 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 ELOCQ15369 112 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 FYB2Q5VWT5 728 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 C6orf15Q6UXA7 325 aaPredicted RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 ZPBP2Q6X784 338 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 PIM3Q86V86 326 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 KLF16Q9BXK1 252 aaPredicted RBP6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 TRIM55Q9BYV6 548 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 LRTM1Q9HBL6 345 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 MKL2Q9ULH7 1088 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 STRIP2Q9ULQ0 834 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 MAPK8IP1Q9UQF2 711 aa6.6□□□□□ -1.35
BRAFP1-201ENST00000445336 TMEM110-MUSTN1A8MSY1 372 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 ABLIM1O14639 778 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 DLSTP36957 453 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 NDST2P52849 883 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 GEN1Q17RS7 908 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 HNRNPA1L2Q32P51 320 aaKnown RBP6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 FAM46CQ5VWP2 391 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 C9orf57Q5W0N0 161 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 PLEKHA7Q6IQ23 1121 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 C12orf54Q6X4T0 127 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 DPH6Q7L8W6 267 aa6.59□□□□□ -1.35
BRAFP1-201ENST00000445336 GKN2Q86XP6 184 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms