RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MAP3K6O95382 1288 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CD70P32970 193 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CSKP41240 450 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 COPS2P61201 443 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 ADCY2Q08462 1091 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 SPEM2Q0P670 501 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 LMAN2Q12907 356 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 TFDP2Q14188 446 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 DGKKQ5KSL6 1271 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 C6orf118Q5T5N4 469 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 GRAMD4Q6IC98 578 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CXorf57Q6NSI4 855 aaKnown RBP17.64■□□□□ 0.41
LIME1-202ENST00000444951 ADAT2Q7Z6V5 191 aaKnown RBP17.64■□□□□ 0.41
LIME1-202ENST00000444951 NPWQ8N729 165 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 OR52K2Q8NGK3 314 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 FIBINQ8TAL6 211 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 UBE2Q2Q8WVN8 375 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 OSBPL9Q96SU4 736 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 SPON2Q9BUD6 331 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CARD9Q9H257 536 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 FBRSL1Q9HCM7 1045 aaKnown RBP17.64■□□□□ 0.41
LIME1-202ENST00000444951 GMEB2Q9UKD1 530 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 SNX12Q9UMY4 172 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 HEY1Q9Y5J3 304 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 DFFAO00273 331 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 MZF1P28698 734 aaPredicted RBP17.63■□□□□ 0.41
LIME1-202ENST00000444951 HLA-FP30511 346 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 OPRD1P41143 372 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 MAPKAPK2P49137 400 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 AMPD2Q01433 879 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 MESP2Q0VG99 397 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 PPP2R5EQ16537 467 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 TAZQ16635 292 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 NCBP2-AS2Q69YL0 99 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 LAIR1Q6GTX8 287 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 FSTL4Q6MZW2 842 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 NPNTQ6UXI9 565 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 TP53INP2Q8IXH6 220 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 ETFBKMTQ8IXQ9 262 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 OR7D4Q8NG98 312 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 MS4A14Q96JA4 679 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 PNKPQ96T60 521 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 SLC2A11Q9BYW1 496 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 KIAA1522Q9P206 1035 aaPredicted RBP17.63■□□□□ 0.41
LIME1-202ENST00000444951 SAE1Q9UBE0 346 aaPredicted RBP17.63■□□□□ 0.41
LIME1-202ENST00000444951 ZNF212Q9UDV6 495 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 GGA2Q9UJY4 613 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.63■□□□□ 0.41
LIME1-202ENST00000444951 RALGAPA1Q6GYQ0 2036 aa17.63■□□□□ 0.41
LIME1-202ENST00000444951 A0A0D9SEW6 157 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 WASH4PA8MWX3 477 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 ESPNB1AK53 854 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 ZNF185O15231 689 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 MFSD11O43934 449 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 RAMP2O60895 175 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 ACVRL1P37023 503 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 PXNP49023 591 aaPredicted RBP17.62■□□□□ 0.41
LIME1-202ENST00000444951 GALK1P51570 392 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 GNA12Q03113 381 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 GBE1Q04446 702 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 SIM2Q14190 667 aaPredicted RBP17.62■□□□□ 0.41
LIME1-202ENST00000444951 POLD3Q15054 466 aaPredicted RBP17.62■□□□□ 0.41
LIME1-202ENST00000444951 TMEM196Q5HYL7 178 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 SETD3Q86TU7 594 aaPredicted RBP17.62■□□□□ 0.41
LIME1-202ENST00000444951 VSIG1Q86XK7 387 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 APCDD1Q8J025 514 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 PLD5Q8N7P1 536 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 PBKQ96KB5 322 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 P2RY13Q9BPV8 354 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 FAM118BQ9BPY3 351 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 SLC39A8Q9C0K1 460 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 NOL6Q9H6R4 1146 aaKnown RBP17.62■□□□□ 0.41
LIME1-202ENST00000444951 DONSONQ9NYP3 566 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 SMARCAL1Q9NZC9 954 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 VPS28Q9UK41 221 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 EML5Q05BV3 1969 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 DOCK4Q8N1I0 1966 aa17.62■□□□□ 0.41
LIME1-202ENST00000444951 TCRBV7S2A1N4TA0A589 114 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 ILVBLA1L0T0 632 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 RASA4BC9J798 803 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 RASA4O43374 803 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 TJP3O95049 919 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 EGFP01133 1207 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 CISD3P0C7P0 127 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 PABPC1P11940 636 aaKnown RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 ZFXP17010 805 aaPredicted RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 SERPINB6P35237 376 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 GEN1Q17RS7 908 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 LONRF2Q1L5Z9 754 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 RNF43Q68DV7 783 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 SLC9A4Q6AI14 798 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 BBS12Q6ZW61 710 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms