RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CETN3O15182 167 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 MYF5P13349 255 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 DNM1Q05193 864 aaKnown RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 STILQ15468 1287 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 ZNF284Q2VY69 593 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 POM121L1PQ3SYA9 428 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 HS1BP3Q53T59 392 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 ZC3H12AQ5D1E8 599 aaKnown RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 TMEM270Q6UE05 265 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 ABI3BPQ7Z7G0 1075 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 CCAR2Q8N163 923 aaKnown RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 SLC22A18ASQ8N1D0 253 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 ERCC4Q92889 916 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 CCDC47Q96A33 483 aaKnown RBP14.81□□□□□ -0.04
HMGN1-208ENST00000443046 GRAMD1AQ96CP6 724 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 MIS12Q9H081 205 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 RP1P56715 2156 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 KCNU1A8MYU2 1149 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 C1QTNF3-AMACRE9PGA6 284 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 K7ESM1 405 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 SLC31A1O15431 190 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 ALPPL2P10696 532 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 PRLRP16471 622 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 TGM2P21980 687 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 GPD2P43304 727 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 NUMBP49757 651 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 DUSP3P51452 185 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-208ENST00000443046 DLG2Q15700 870 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 GCNT7Q6ZNI0 430 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 HORMAD1Q86X24 394 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 CHSY1Q86X52 802 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 OR13H1Q8NG92 308 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 SLC35C1Q96A29 364 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 NOX5Q96PH1 765 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 FEM1AQ9BSK4 669 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 DUSP23Q9BVJ7 150 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 SATB2Q9UPW6 733 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 PCDHGA8Q9Y5G5 932 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 OR51B4Q9Y5P0 310 aa14.8□□□□□ -0.04
HMGN1-208ENST00000443046 A0A1W2PQU0 124 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 TCAF2A6NFQ2 919 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 NEMP2A6NFY4 417 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 CDRT15L2A8MXV6 281 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 F5H5T6 163 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 PMM2O15305 246 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 SLC16A3O15427 465 aaKnown RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 SART1O43290 800 aaKnown RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 SLC28A2O43868 658 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 CALCAP01258 141 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 APOEP02649 317 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 CTSLP07711 333 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 BRD2P25440 801 aaKnown RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 NDUFA8P51970 172 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 OXCT1P55809 520 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 RELNP78509 3460 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 LRMPQ12912 555 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 DCAF17Q5H9S7 520 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 TTC39BQ5VTQ0 682 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 KIAA1614Q5VZ46 1190 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 Q6ZVU0 165 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 CIR1Q86X95 450 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 OR52K2Q8NGK3 314 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 FAM174AQ8TBP5 190 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 IFI44Q8TCB0 444 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 MAPK15Q8TD08 544 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 TRPM6Q9BX84 2022 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 ABCG4Q9H172 646 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 OSBPL2Q9H1P3 480 aa14.79□□□□□ -0.04
HMGN1-208ENST00000443046 ZFR2Q9UPR6 939 aaKnown RBP14.79□□□□□ -0.04
HMGN1-208ENST00000443046 RIOK3O14730 519 aaKnown RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 TRUB2O95900 331 aaKnown RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 HNRNPA2B1P22626 353 aaKnown RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 SYKP43405 635 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 CSRP3P50461 194 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 PITX1P78337 314 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 PKP1Q13835 747 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 ARL13BQ3SXY8 428 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 TMEM259Q4ZIN3 620 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 C3orf38Q5JPI3 329 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 TCERG1LQ5VWI1 586 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 FBXL22Q6P050 247 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 CLEC14AQ86T13 490 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 DCP2Q8IU60 420 aaKnown RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 SH2D3CQ8N5H7 860 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 TMIEQ8NEW7 156 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 LMO3Q8TAP4 145 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 STK32AQ8WU08 396 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 KLK6Q92876 244 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 KAT5Q92993 513 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 FAM149B1Q96BN6 582 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 CCDC97Q96F63 343 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 ATXN7L3BQ96GX2 97 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 BMFQ96LC9 184 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 MYOCQ99972 504 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 TRIM62Q9BVG3 475 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms