RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SEZ6Q53EL9 994 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 LRRC23Q53EV4 343 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ODF2Q5BJF6 829 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ANKRD20A2Q5SQ80 823 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ANKRD20A1Q5TYW2 823 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ANKRD20A3Q5VUR7 823 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 C9orf57Q5W0N0 161 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TBC1D1Q86TI0 1168 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM74Q86UV6 250 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM73Q86UV7 250 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 FAM124AQ86V42 546 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 LRRTM3Q86VH5 581 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 CACUL1Q86Y37 369 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SCN4BQ8IWT1 228 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 DAW1Q8N136 415 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ATL2Q8NHH9 583 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 B4GALNT2Q8NHY0 566 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 C1orf216Q8TAB5 229 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 MIPOL1Q8TD10 442 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 LZICQ8WZA0 190 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 EXTL1Q92935 676 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 RBM41Q96IZ5 413 aaKnown RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 PBKQ96KB5 322 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ELF4Q99607 663 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 EPAS1Q99814 870 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 OSBPL1AQ9BXW6 950 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ACE2Q9BYF1 805 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 CCSER1Q9C0I3 900 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TMEM60Q9H2L4 133 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SUDS3Q9H7L9 328 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 POLR1BQ9H9Y6 1135 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 C17orf75Q9HAS0 396 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 POLD4Q9HCU8 107 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 KMT5AQ9NQR1 393 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 DNAJC17Q9NVM6 304 aaKnown RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 NOVA2Q9UNW9 492 aaKnown RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 L3MBTL1Q9Y468 752 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 DUSP10Q9Y6W6 482 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 CLEC18AA5D8T8 446 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 BTNL10A8MVZ5 291 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 PIRO00625 290 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CLDN3O15551 220 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 HOXC11O43248 304 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SART1O43290 800 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 FAM189A1O60320 539 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 HIP1RO75146 1068 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ATP5HO75947 161 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 GJB6O95452 261 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 OAS1P00973 400 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 RPN1P04843 607 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ITGB2P05107 769 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ADRB2P07550 413 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 FAM87AP0C7U9 286 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 RARAP10276 462 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 MBL2P11226 248 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ITGB6P18564 788 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ATP6V1C1P21283 382 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CTNNA1P35221 906 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 GRIK1P39086 918 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 PRCPP42785 496 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ARRB1P49407 418 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 COPS2P61201 443 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ASIC1P78348 528 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SLC7A9P82251 487 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 FOXK1P85037 733 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 DAB2P98082 770 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ZXDBP98169 803 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 MYL7Q01449 175 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 MAPK7Q13164 816 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 IGFBP7Q16270 282 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 PARP6Q2NL67 630 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ASTE1Q2TB18 679 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ARL13BQ3SXY8 428 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 FUT11Q495W5 492 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 HHATQ5VTY9 493 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CLEC18BQ6UXF7 455 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 HOOK3Q86VS8 718 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 TMPRSS6Q8IU80 811 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ETFBKMTQ8IXQ9 262 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ARHGAP18Q8N392 663 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CLEC18CQ8NCF0 446 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 OTUB2Q96DC9 234 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 RAB3IPQ96QF0 476 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CCNL2Q96S94 520 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SEMA3CQ99985 751 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CCDC28BQ9BUN5 200 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 TMEM109Q9BVC6 243 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 SLC25A18Q9H1K4 315 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 VCXQ9H320 206 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 C6orf106Q9H6K1 298 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 LUC7LQ9NQ29 371 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms