RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CATSPERBQ9H7T0 1116 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 IMPACTQ9P2X3 320 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 LCMT1Q9UIC8 334 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 HS3ST2Q9Y278 367 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 ACTL7AQ9Y615 435 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 SPAG17Q6Q759 2223 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 IGHV1OR15-9A0A0B4J2B8 117 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 WASH4PA8MWX3 477 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 EIF3CLB5ME19 914 aaKnown RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 ATP9BO43861 1147 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 HTR7P34969 479 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 TAS2R40P59535 323 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 RPS14P62263 151 aaKnown RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 ARF5P84085 180 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 MESDQ14696 234 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 DLG2Q15700 870 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 DPYSL2Q16555 572 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 LAIR1Q6GTX8 287 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 LEKR1Q6ZMV7 388 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 Q6ZVU0 165 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 TMTC1Q8IUR5 882 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 TMEM139Q8IV31 216 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 STK40Q8N2I9 435 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 ATP11CQ8NB49 1132 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 TEKT4Q8WW24 435 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 PTPRN2Q92932 1015 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 EIF3CQ99613 913 aaKnown RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 ACE2Q9BYF1 805 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 RSPH9Q9H1X1 276 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 MAGEH1Q9H213 219 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 FBRSQ9HAH7 460 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 KLHL11Q9NVR0 708 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 USP36Q9P275 1121 aaKnown RBP18.45■□□□□ 0.54
CPSF4-205ENST00000440514 NCDNQ9UBB6 729 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 INTUQ9ULD6 942 aa18.45■□□□□ 0.54
CPSF4-205ENST00000440514 TARSL2A2RTX5 802 aaKnown RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 DAPK3O43293 454 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 SMAD6O43541 496 aaKnown RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ZNF217O75362 1048 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 MTA2O94776 668 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 NDUFA10O95299 355 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ETFBP38117 255 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 VASPP50552 380 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 POLD3Q15054 466 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 SPA17Q15506 151 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ELF2Q15723 593 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 BOLA3Q53S33 107 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 PMS2CLQ68D20 193 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ZNF776Q68DI1 518 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 C22orf39Q6P5X5 142 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ZNF354CQ86Y25 554 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 DCLK2Q8N568 766 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 HMCESQ96FZ2 354 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 CELF6Q96J87 481 aaKnown RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 BAG1Q99933 345 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 HINFPQ9BQA5 517 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 KLC2Q9H0B6 622 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 PCDH18Q9HCL0 1135 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 LUC7LQ9NQ29 371 aaKnown RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 CWC15Q9P013 229 aaKnown RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 PCDHA13Q9Y5I0 950 aa18.44■□□□□ 0.54
CPSF4-205ENST00000440514 EPN1Q9Y6I3 576 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 ZFHX2Q9C0A1 2572 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-205ENST00000440514 OTOGLQ3ZCN5 2332 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 RASA4BC9J798 803 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 H3BRJ5 948 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 MAP3K13O43283 966 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 RASA4O43374 803 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 BNIP3LO60238 219 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 ACADMP11310 421 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 ERCC2P18074 760 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 MAN1A1P33908 653 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 PSMD8P48556 350 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 SERPINH1P50454 418 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 TPMTP51580 245 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 BYSLQ13895 437 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 DPYSQ14117 519 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 HADHQ16836 314 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 ATP13A4Q4VNC1 1196 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 RETSATQ6NUM9 610 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 ARMCX6Q7L4S7 300 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 METTL3Q86U44 580 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 FAM124AQ86V42 546 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 C11orf74Q86VG3 221 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 MMAAQ8IVH4 418 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 UMODL1-AS1Q8N2C9 162 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 NPWQ8N729 165 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 NETO2Q8NC67 525 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 RUBCNQ92622 972 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 ZC3H10Q96K80 434 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 FAM129BQ96TA1 746 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 GMEB2Q9UKD1 530 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 FCF1Q9Y324 198 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 REXO2Q9Y3B8 237 aaKnown RBP18.43■□□□□ 0.54
CPSF4-205ENST00000440514 MFHAS1Q9Y4C4 1052 aa18.43■□□□□ 0.54
CPSF4-205ENST00000440514 THADAQ6YHU6 1953 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 TNRC6BQ9UPQ9 1833 aaKnown RBP18.42■□□□□ 0.54
CPSF4-205ENST00000440514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 CD160O95971 181 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms