RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 POTEHQ6S545 545 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 EPGNQ6UW88 154 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 SLC41A1Q8IVJ1 513 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 LILRA2Q8N149 483 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 CCDC185Q8N715 623 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 DLG3Q92796 817 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 VPS39Q96JC1 886 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 C2orf40Q9H1Z8 148 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 CDT1Q9H211 546 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 ADNPQ9H2P0 1102 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 POLR1BQ9H9Y6 1135 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 PLGRKTQ9HBL7 147 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 LRRC4Q9HBW1 653 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 PTPRHQ9HD43 1115 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 DTLQ9NZJ0 730 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 XPR1Q9UBH6 696 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 BARX2Q9UMQ3 279 aaPredicted RBP9.21□□□□□ -0.93
COPB1-202ENST00000439561 RAP2CQ9Y3L5 183 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 TRIM38O00635 465 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 MRASO14807 208 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 H6PDO95479 791 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 APBA3O96018 575 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 RBP5P82980 135 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 STX5Q13190 355 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CSHL1Q14406 222 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 GRM2Q14416 872 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 POU6F1Q14863 301 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 RWDD4Q6NW29 188 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 C4orf22Q6V702 233 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 RPS27LQ71UM5 84 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 PGAM4Q8N0Y7 254 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 ZNF670Q9BS34 389 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 NAT9Q9BTE0 207 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 XYLT2Q9H1B5 865 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 ARMC7Q9H6L4 198 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CHRAC1Q9NRG0 131 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 ZDHHC2Q9UIJ5 367 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CPSF3Q9UKF6 684 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 TSC22D4Q9Y3Q8 395 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 J3QRK9 145 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 EEF2KO00418 725 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 NR5A2O00482 541 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 DENRO43583 198 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 CILPO75339 1184 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 RGS20O76081 388 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 DDHD2O94830 711 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CCDC130P13994 396 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 TPSB2P20231 275 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 UBA1P22314 1058 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 MAGEA10P43363 369 aaPredicted RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 CTBP1Q13363 440 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 TPSAB1Q15661 275 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 LDLRAP1Q5SW96 308 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 OTUD3Q5T2D3 398 aaPredicted RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 TRNP1Q6NT89 227 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 XRRA1Q6P2D8 792 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 DDIASQ8IXT1 998 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 IPMKQ8NFU5 416 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 TMEM174Q8WUU8 243 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 FBXL8Q96CD0 374 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CCDC138Q96M89 665 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 KLHL32Q96NJ5 620 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CCDC90BQ9GZT6 254 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 DRC3Q9H069 523 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 SNX25Q9H3E2 840 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 TMEM134Q9H6X4 195 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 CLK4Q9HAZ1 481 aaKnown RBP9.21□□□□□ -0.94
COPB1-202ENST00000439561 PNPLA3Q9NST1 481 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 DPP3Q9NY33 737 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 HSFX1Q9UBD0 423 aa9.21□□□□□ -0.94
COPB1-202ENST00000439561 NEMP2A6NFY4 417 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 M0QYT0 321 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PSMD12O00232 456 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 UBDO15205 165 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 TIMM44O43615 452 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 MSCO60682 206 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 FUT4P22083 530 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 IL10P22301 178 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 NR4A1P22736 598 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 HMOX2P30519 316 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 SLC7A2P52569 658 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 ITKQ08881 620 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 ITGADQ13349 1161 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 TNFAIP1Q13829 316 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PLCL1Q15111 1095 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 MGAT5BQ3V5L5 792 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 FUT11Q495W5 492 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CHST15Q7LFX5 561 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 DHFR2Q86XF0 187 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 RBM12BQ8IXT5 1001 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 SPATA33Q96N06 139 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 TBCBQ99426 244 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 MPHOSPH6Q99547 160 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 ATXN3LQ9H3M9 355 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 EBF1Q9UH73 591 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CIDEBQ9UHD4 219 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms