RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF483Q8TF39 744 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 ILKAPQ9H0C8 392 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 PLSCR2Q9NRY7 297 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 UTP6Q9NYH9 597 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 EVLQ9UI08 416 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 CASTOR2A6NHX0 329 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 XPOTO43592 962 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 TSPAN1O60635 241 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SLC25A27O95847 323 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 NFKB1P19838 968 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 FDFT1P37268 417 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SLC18A1P54219 525 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 OCRLQ01968 901 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 RPS6KA2Q15349 733 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ARL13BQ3SXY8 428 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PPM1LQ5SGD2 360 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 NOTUMQ6P988 496 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CYP2R1Q6VVX0 501 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PLPPR4Q7Z2D5 763 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 IFNEQ86WN2 208 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 KBTBD2Q8IY47 623 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ZNF567Q8N184 647 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 KCTD4Q8WVF5 259 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 C17orf50Q8WW18 174 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 C7orf26Q96N11 449 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 RNF39Q9H2S5 420 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 LRRC40Q9H9A6 602 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SSU72Q9NP77 194 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 ARHGEF4Q9NR80 690 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 KIAA1257Q9ULG3 409 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CDY2AQ9Y6F7 541 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CDY1Q9Y6F8 540 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 V9GYQ6 96 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 BRCA1P38398 1863 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 A0A0G2JLL6 359 aaPredicted RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 ATP6AP2A0A1C7CYW4 349 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 BCLAF3A2AJT9 711 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 XPO1O14980 1071 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 MAP3K13O43283 966 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 CRCPO75575 148 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 ATP6AP2O75787 350 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 TGDSO95455 350 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 ALDOAP04075 364 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 C2P06681 752 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 LYNP07948 512 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 HNRNPLP14866 589 aaKnown RBP eCLIP8.21□□□□□ -1.09
HPS4-205ENST00000429411 PGAM1P18669 254 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 GRK4P32298 578 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 PTPN7P35236 360 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 AQP4P55087 323 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 CDC16Q13042 620 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 DBN1Q16643 649 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 NRF1Q16656 503 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 KIF19Q2TAC6 998 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 KYAT3Q6YP21 454 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 PRRT2Q7Z6L0 340 aaPredicted RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 OR6Y1Q8NGX8 325 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 TMEM174Q8WUU8 243 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 LENG8Q96PV6 779 aaPredicted RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 KCNK16Q96T55 309 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 SERPINI1Q99574 410 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 WDCPQ9H6R7 721 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 NMRAL1Q9HBL8 299 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 SPC25Q9HBM1 224 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 TMEM165Q9HC07 324 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 DDX18Q9NVP1 670 aaKnown RBP8.21□□□□□ -1.09
HPS4-205ENST00000429411 COPG2Q9UBF2 871 aa8.21□□□□□ -1.09
HPS4-205ENST00000429411 KIF13BQ9NQT8 1826 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 TTC28Q96AY4 2481 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 STX16-NPEPL1H3BU86 382 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 ZBTB24O43167 697 aaPredicted RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 BUD23O43709 281 aaKnown RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 LTFP02788 710 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 IDH3AP50213 366 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 CAP1Q01518 475 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 CSHL1Q14406 222 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 KRT72Q14CN4 511 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 SLC9B1Q4ZJI4 515 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 MAP3K21Q5TCX8 1036 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 SEL1L3Q68CR1 1132 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 CDCA2Q69YH5 1023 aaPredicted RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 MTHFD1LQ6UB35 978 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 FRMD7Q6ZUT3 714 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 DHDDSQ86SQ9 333 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 SLC41A1Q8IVJ1 513 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 RAVER1Q8IY67 606 aaKnown RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 UBR7Q8N806 425 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 SPATA22Q8NHS9 363 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 MZB1Q8WU39 189 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 ABTB1Q969K4 478 aaPredicted RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 EME1Q96AY2 570 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 LRRC39Q96DD0 335 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms