RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MMEL1Q495T6 779 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 MFSD7Q6UXD7 560 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 FAM111AQ96PZ2 611 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 KCNK16Q96T55 309 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 EVA1BQ9NVM1 165 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 GNEQ9Y223 722 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 DNAJC25-GNG10A0A024R161 153 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 EME2A4GXA9 379 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 PSMD3O43242 534 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CHEK2O96017 543 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ETS1P14921 441 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 EPB42P16452 691 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ITGALP20701 1170 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SETMARQ53H47 684 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ZNF461Q8TAF7 563 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SHC3Q92529 594 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 KREMEN1Q96MU8 473 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 KXD1Q9BQD3 176 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CA14Q9ULX7 337 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 DNAJC16Q9Y2G8 782 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MAGEA13PA6NCF6 341 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SYNDIG1LA6NDD5 238 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TRIM16O95361 564 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 HSPA4LO95757 839 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 GFAPP14136 432 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 AMD1P17707 334 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 LMO2P25791 158 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 HTR1BP28222 390 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SSTR1P30872 391 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ALDH18A1P54886 795 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MED21Q13503 144 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 WLSQ5T9L3 541 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 IRAK1BP1Q5VVH5 260 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ANO7Q6IWH7 933 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 C11orf96Q7Z7L8 435 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ZDHHC17Q8IUH5 632 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TRIML2Q8N7C3 387 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 FBXO36Q8NEA4 188 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 EXD1Q8NHP7 514 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 OR8D1Q8WZ84 308 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 HLA-CQ95604 372 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 NMD3Q96D46 503 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 DRC3Q9H069 523 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MANSC1Q9H8J5 431 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SPATA6Q9NWH7 488 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 HEY2Q9UBP5 337 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 NDOR1Q9UHB4 597 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 RIF1Q5UIP0 2472 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 O00370 1275 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CBX6O95503 412 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CALB2P22676 271 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 EDNRBP24530 442 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MAT2AP31153 395 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 IMPG1Q17R60 797 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ZSWIM2Q8NEG5 633 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ART4Q93070 314 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CNGB3Q9NQW8 809 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ARHGEF38Q9NXL2 777 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MPP6Q9NZW5 540 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MYH15Q9Y2K3 1946 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ZW10O43264 779 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MGRN1O60291 552 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 CREB1P16220 341 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TYMPP19971 482 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TAC1P20366 129 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 HADHAP40939 763 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 GEMP55040 296 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TPD52P55327 224 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 NCALDP61601 193 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 MTA1Q13330 715 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TFDP3Q5H9I0 405 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ARMC12Q5T9G4 340 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 BPIFB1Q8TDL5 484 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 STK32AQ8WU08 396 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ZNF669Q96BR6 464 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 RNPEPL1Q9HAU8 725 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SAE1Q9UBE0 346 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 SEPT3Q9UH03 358 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 PAIP2BQ9ULR5 123 aaKnown RBP10.84□□□□□ -0.67
TCOF1-204ENST00000427724 TELO2Q9Y4R8 837 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 ASB3Q9Y575 518 aa10.84□□□□□ -0.67
TCOF1-204ENST00000427724 LAMB4A4D0S4 1761 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 ZDBF2Q9HCK1 2354 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 AKAP11Q9UKA4 1901 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 DPPA5A6NC42 116 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms