RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ATAT1Q5SQI0 421 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 DEPDC1Q5TB30 811 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 KRT79Q5XKE5 535 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 HAUS3Q68CZ6 603 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 ANKRD16Q6P6B7 361 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 MOXD1Q6UVY6 613 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 C11orf57Q6ZUT1 292 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 DAAM2Q86T65 1068 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 LUZP1Q86V48 1076 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 GLCCI1Q86VQ1 547 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 TRIML1Q8N9V2 468 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 ERMNQ8TAM6 284 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 TBC1D5Q92609 795 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 EPSTI1Q96J88 318 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 C12orf42Q96LP6 360 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 P2RX7Q99572 595 aaKnown RBP4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 CCSER1Q9C0I3 900 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 CUEDC2Q9H467 287 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 TAF1DQ9H5J8 278 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 TTC12Q9H892 705 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 MAGEF1Q9HAY2 307 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 RAVER2Q9HCJ3 691 aaKnown RBP4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 TCF7L1Q9HCS4 588 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 RNF146Q9NTX7 359 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 RMND1Q9NWS8 449 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 DLL3Q9NYJ7 618 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 LRWD1Q9UFC0 647 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 ZNF180Q9UJW8 692 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 SSX2IPQ9Y2D8 614 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 MYH11P35749 1972 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 SYNRGQ9UMZ2 1314 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 SMCHD1A6NHR9 2005 aa4.16□□□□□ -1.74
HMGB3P20-201ENST00000417997 WDR81Q562E7 1941 aa4.15□□□□□ -1.74
HMGB3P20-201ENST00000417997 A1L4Q6 167 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PP2D1A8MPX8 630 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 SMTNL1A8MU46 457 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 MEIS2O14770 477 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBX3O15119 743 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ABLIM3O94929 683 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ONECUT2O95948 504 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ERBB2P04626 1255 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 NPSP0C0P6 89 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYBP10242 640 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 HSPA6P17066 643 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 HTR1BP28222 390 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 MPGP29372 298 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCT6AP40227 531 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 VIPR2P41587 438 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ATXN1P54253 815 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 OAZ1P54368 228 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPTEP56180 551 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 RAB1AP62820 205 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 UBXN2AP68543 259 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ASIC1P78348 528 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPATQ06203 517 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPIL2Q13356 520 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PIN1Q13526 163 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 STIM1Q13586 685 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 DHX8Q14562 1220 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPD52L1Q16890 204 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 DPCR1Q3MIW9 517 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRAMEF17Q5VTA0 474 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 LRCH2Q5VUJ6 765 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PAPD7Q5XG87 772 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ISM2Q6H9L7 571 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 NCAPH2Q6IBW4 605 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 SNRNP48Q6IEG0 339 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 USP49Q70CQ1 688 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 WDR53Q7Z5U6 358 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PLA2G4DQ86XP0 818 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ERO1BQ86YB8 467 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 DENND1CQ8IV53 801 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 SAMD3Q8N6K7 520 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 C4orf32Q8N8J7 132 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 DIS3LQ8TF46 1054 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 JPH3Q8WXH2 748 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 STAMQ92783 540 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 OPTNQ96CV9 577 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PAGE5Q96GU1 130 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF778Q96MU6 729 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PLIN2Q99541 437 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 SH2D3AQ9BRG2 576 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 LRRC27Q9C0I9 530 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 NT5C3AQ9H0P0 336 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 ACAD9Q9H845 621 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC38A10Q9HBR0 1119 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 NRIP3Q9NQ35 241 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 DUSP22Q9NRW4 184 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 EXOC1Q9NV70 894 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PIH1D1Q9NWS0 290 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 TUBE1Q9UJT0 475 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 MAN1B1Q9UKM7 699 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 NDRG4Q9ULP0 352 aaKnown RBP4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 PCDHA12Q9UN75 941 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 AFG3L2Q9Y4W6 797 aa4.15□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP3A7-CYP3A51PA0A087WV96 503 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 A0A087WWV3 80 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 VWA5AO00534 786 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms