RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ARF5P84085 180 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 PFKPQ01813 784 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 GEN1Q17RS7 908 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 FUT11Q495W5 492 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 RALGPS2Q86X27 583 aaPredicted RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 MMGT1Q8N4V1 131 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 CEP112Q8N8E3 955 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 BHMTQ93088 406 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 HAUS1Q96CS2 278 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 ZNF419Q96HQ0 510 aaPredicted RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 LGMNQ99538 433 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 IL12RB2Q99665 862 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 C8orf33Q9H7E9 229 aaPredicted RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 ABCB8Q9NUT2 735 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 IPO11Q9UI26 975 aaKnown RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 CKAP5Q14008 2032 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 ZSCAN5CA6NGD5 496 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 J3KR12 359 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 PPP1R12AO14974 1030 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 MCF2LO15068 1137 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 MAP3K6O95382 1288 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 VAV1P15498 845 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 STIP1P31948 543 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 CTHP32929 405 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 IFI35P80217 286 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 SLC20A2Q08357 652 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 HNRNPDQ14103 355 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 INO80DQ53TQ3 878 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 IER5LQ5T953 404 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 CDKL3Q8IVW4 592 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 ZNF687Q8N1G0 1237 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 NAT16Q8N8M0 369 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 TERB1Q8NA31 727 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 KDM1BQ8NB78 822 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 ATL2Q8NHH9 583 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 CSGALNACT1Q8TDX6 532 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 TFB1MQ8WVM0 346 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 EZH1Q92800 747 aaPredicted RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 MAGOHBQ96A72 148 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 PNKPQ96T60 521 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 FAM118BQ9BPY3 351 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 FBRSL1Q9HCM7 1045 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
CNN3-203ENST00000415017 DEC1Q9P2X7 70 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 VPS51Q9UID3 782 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 STARD13Q9Y3M8 1113 aa13.57□□□□□ -0.24
CNN3-203ENST00000415017 ANKRD36A6QL64 1941 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 GOLGA6L10A0A0M3HER8 536 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CFAP69A5D8W1 941 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 C5orf60A6NFR6 353 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 DFFAO00273 331 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 MTSS1O43312 755 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 GLDCP23378 1020 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 RBL1P28749 1068 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 GRIA2P42262 883 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 KCNJ1P48048 391 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 GALK1P51570 392 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 SULT2A1Q06520 285 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ENPP2Q13822 863 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 EIF4HQ15056 248 aaKnown RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 TMEM196Q5HYL7 178 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 TMCO4Q5TGY1 634 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ALG1LQ6GMV1 187 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 GRAMD4Q6IC98 578 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 TIGD7Q6NT04 549 aaPredicted RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 CCDC137Q6PK04 289 aaKnown RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 TXNDC11Q6PKC3 985 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ZC3H18Q86VM9 953 aaKnown RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 RNF135Q8IUD6 432 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CCDC117Q8IWD4 279 aaPredicted RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CCDC13Q8IYE1 715 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ALLCQ8N6M5 410 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CNTD1Q8N815 330 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 HTR3CQ8WXA8 447 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CASKIN2Q8WXE0 1202 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 VOPP1Q96AW1 172 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 MYO19Q96H55 970 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 MRGPRX3Q96LB0 322 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 RUNDC3BQ96NL0 473 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 C2orf49Q9BVC5 232 aaPredicted RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 CARD6Q9BX69 1037 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms