RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 FAM163BP0C2L3 166 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 JMJD7P0C870 316 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 RNF224P0DH78 156 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 PABPC1P11940 636 aaKnown RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 HGFP14210 728 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 C5AR1P21730 350 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 GNLYP22749 145 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 HOXD9P28356 352 aaPredicted RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 ZNF131P52739 623 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 PDX1P52945 283 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 MPPE1Q53F39 396 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 OXLD1Q5BKU9 147 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 BMP2KLQ5H9B9 411 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 HYIQ5T013 277 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 CAPRIN2Q6IMN6 1127 aaKnown RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 PAQR9Q6ZVX9 377 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 DYMQ7RTS9 669 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 TADA2BQ86TJ2 420 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 ZFAND4Q86XD8 727 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 AADATQ8N5Z0 425 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 ZSWIM2Q8NEG5 633 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 NOC3LQ8WTT2 800 aaKnown RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 SAAL1Q96ER3 474 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 CDK5RAP3Q96JB5 506 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 FIZ1Q96SL8 496 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 SLC30A3Q99726 388 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 SLC12A9Q9BXP2 914 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 SYNDIG1Q9H7V2 258 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 CAAP1Q9H8G2 361 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 NMUR1Q9HB89 426 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 EPB41L5Q9HCM4 733 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 INTS13Q9NVM9 706 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 ZDHHC3Q9NYG2 299 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 CYTH4Q9UIA0 394 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 GGA2Q9UJY4 613 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 CA5BQ9Y2D0 317 aa6.59□□□□□ -1.35
LINC00396-201ENST00000411690 COL27A1Q8IZC6 1860 aaPredicted RBP6.59□□□□□ -1.35
LINC00396-201ENST00000411690 UBE4BO95155 1302 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 A0A1W2PQH9 124 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 GOLGA8IPA6NC78 632 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 WIPF3A6NGB9 483 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 GOLGA8JA6NMD2 632 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 C9orf172C9J069 976 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 TMX2-CTNND1H3BSU7 103 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 MUSKO15146 869 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 RNGTTO60942 597 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 BEST1O76090 585 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 CLDN1O95832 211 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 PRKCGP05129 697 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 RALAP11233 206 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 PSMD8P48556 350 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 MAP3K7CLP57077 242 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 HNRNPKP61978 463 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 TNNC1P63316 161 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 GUCY1B3Q02153 619 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 KLRB1Q12918 225 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 DHX8Q14562 1220 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 NR0B2Q15466 257 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 IL17AQ16552 155 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 DUOXA2Q1HG44 320 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 HNRNPA1L2Q32P51 320 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 WDR72Q3MJ13 1102 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 SETMARQ53H47 684 aaPredicted RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 ZNF542PQ5EBM4 170 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 PERM1Q5SV97 790 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 C20orf204Q6ZNR8 217 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 RSRC2Q7L4I2 434 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 KIAA0907Q7Z7F0 614 aaPredicted RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 GPBP1Q86WP2 473 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 HEATR4Q86WZ0 1026 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 FAM114A1Q8IWE2 563 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 ZC3H3Q8IXZ2 948 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 ZMIZ2Q8NF64 920 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 OR5B17Q8NGF7 314 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 TP53INP1Q96A56 240 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 TMA16Q96EY4 203 aaKnown RBP6.58□□□□□ -1.36
LINC00396-201ENST00000411690 CATSPER2Q96P56 530 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 SMOQ99835 787 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 CALN1Q9BXU9 219 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 STRADBQ9C0K7 418 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 DNAJC28Q9NX36 388 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 PISDQ9UG56 409 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 SERTAD1Q9UHV2 236 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 RASAL2Q9UJF2 1139 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 SALL4Q9UJQ4 1053 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 NAGPAQ9UK23 515 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 SCML2Q9UQR0 700 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 KIF26BQ2KJY2 2108 aa6.58□□□□□ -1.36
LINC00396-201ENST00000411690 NBASA2RRP1 2371 aa6.57□□□□□ -1.36
LINC00396-201ENST00000411690 PRAMEF33A0A0G2JMD5 474 aa6.57□□□□□ -1.36
LINC00396-201ENST00000411690 A0A1B0GTL3 188 aa6.57□□□□□ -1.36
LINC00396-201ENST00000411690 A0A1W2PQ27 194 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms