RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
COL6A2-204ENST00000409416 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
COL6A2-204ENST00000409416 ABCG8Q9H221 673 aa13.65□□□□□ -0.22
COL6A2-204ENST00000409416 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
COL6A2-204ENST00000409416 PLAC1Q9HBJ0 212 aa13.65□□□□□ -0.22
COL6A2-204ENST00000409416 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TM7SF2O76062 418 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 RALBP11234 206 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ETS2P15036 469 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TSHRP16473 764 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 NPR3P17342 541 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 PRKCHP24723 683 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ATICP31939 592 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SLC26A2P50443 739 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SERPINB9P50453 376 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 BTKQ06187 659 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ARL13BQ3SXY8 428 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TMEM198Q66K66 360 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SPATA2LQ8IUW3 424 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SLC41A1Q8IVJ1 513 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 PHC3Q8NDX5 983 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ACVR1CQ8NER5 493 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF212Q9UDV6 495 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TRIP12Q14669 1992 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 BCLAF3A2AJT9 711 aaKnown RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 OR51F1A6NGY5 319 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TTC36A6NLP5 189 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 POLBP06746 335 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 RPL17P18621 184 aaKnown RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 CRHR1P34998 444 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 STILQ15468 1287 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 CNGA3Q16281 694 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TRMT5Q32P41 509 aaKnown RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 MMEL1Q495T6 779 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TMCO4Q5TGY1 634 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SH2D5Q6ZV89 423 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 HPS6Q86YV9 775 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 KCTD4Q8WVF5 259 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 MYLPFQ96A32 169 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ANKRD27Q96NW4 1050 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 RBM22Q9NW64 420 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ADA2Q9NZK5 511 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 RUVBL2Q9Y230 463 aaKnown RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 A0A096LPK6 155 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ALDOAP04075 364 aaKnown RBP13.64□□□□□ -0.23
COL6A2-204ENST00000409416 GABRB2P47870 512 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 MPP1Q00013 466 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SPDYAQ5MJ70 313 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ATPAF2Q8N5M1 289 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 HDAC11Q96DB2 347 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF670Q9BS34 389 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 SIRPGQ9P1W8 387 aa13.64□□□□□ -0.23
COL6A2-204ENST00000409416 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 AXIN1O15169 862 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 SIN3BO75182 1162 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 GLRA3O75311 464 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 GRM5P41594 1212 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF534Q76KX8 674 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 PLD6Q8N2A8 252 aaKnown RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 C3orf58Q8NDZ4 430 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 SKA2Q8WVK7 121 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 HBEGFQ99075 208 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 MAGEA13PA6NCF6 341 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 LIN7AO14910 233 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 CD4P01730 458 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 LTFP02788 710 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 CHRNGP07510 517 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 ITGB6P18564 788 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
COL6A2-204ENST00000409416 RPS6KA3P51812 740 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 TIGD5Q53EQ6 642 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 PHTF2Q8N3S3 785 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 SNX27Q96L92 541 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 DNAI2Q9GZS0 605 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 EBF3Q9H4W6 596 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
COL6A2-204ENST00000409416 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 FAM159BA6NKW6 160 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CRCPO75575 148 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SERPINA6P08185 405 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CPA3P15088 417 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 GARSP41250 739 aaKnown RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 GATMP50440 423 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CDH13P55290 713 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TSTA3Q13630 321 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TEX44Q53QW1 395 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 NCBP2-AS2Q69YL0 99 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SLC9A4Q6AI14 798 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms