RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 TRPM5Q9NZQ8 1165 aa19.35■□□□□ 0.69
USP39-202ENST00000409025 GGA2Q9UJY4 613 aa19.35■□□□□ 0.69
USP39-202ENST00000409025 YIPF1Q9Y548 306 aa19.35■□□□□ 0.69
USP39-202ENST00000409025 ZNF840PA6NDX5 716 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 GOLGA8RI6L899 631 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 BAIAP3O94812 1187 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 ACRP10323 421 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 HMGA1P17096 107 aaKnown RBP19.34■□□□□ 0.69
USP39-202ENST00000409025 NAB1Q13506 487 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 RAB33AQ14088 237 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 HHATQ5VTY9 493 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 SERAC1Q96JX3 654 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 YME1L1Q96TA2 773 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 KLF6Q99612 283 aaPredicted RBP19.34■□□□□ 0.69
USP39-202ENST00000409025 RPS6KL1Q9Y6S9 549 aa19.34■□□□□ 0.69
USP39-202ENST00000409025 MAGEB16A2A368 324 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 TM9SF1O15321 606 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 UGT1A9O60656 530 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 TACR2P21452 398 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 DNAJB2P25686 324 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 KCNQ1P51787 676 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 GEMP55040 296 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 CDH17Q12864 832 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 VEPH1Q14D04 833 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 KLHDC10Q6PID8 442 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 MARK2Q7KZI7 788 aaKnown RBP19.33■□□□□ 0.69
USP39-202ENST00000409025 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.69
USP39-202ENST00000409025 FATE1Q969F0 183 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 HMCESQ96FZ2 354 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 MYRFLQ96LU7 910 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 UGT1A7Q9HAW7 530 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 UGT1A10Q9HAW8 530 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 UGT1A8Q9HAW9 530 aa19.33■□□□□ 0.69
USP39-202ENST00000409025 F5H5T6 163 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 HLA-DQB2P05538 268 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 CNTFP26441 200 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 ELF1P32519 619 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 PPM1AP35813 382 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 SLC18A2Q05940 514 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 NIPAL4Q0D2K0 466 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 SLC1A5Q15758 541 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 NADSYN1Q6IA69 706 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 ZNF449Q6P9G9 518 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 SPATA22Q8NHS9 363 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 APOPT1Q96IL0 206 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 APOL2Q9BQE5 337 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 IL22Q9GZX6 179 aa19.33■□□□□ 0.68
USP39-202ENST00000409025 GOLGA6L7A0A1B0GV03 622 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 PRRG1O14668 218 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 ACSL4O60488 711 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 LPXNO60711 386 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 GJB5O95377 273 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 PYGBP11216 843 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 MAPKAPK2P49137 400 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 HARS2P49590 506 aaKnown RBP19.32■□□□□ 0.68
USP39-202ENST00000409025 RENBPP51606 427 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 MGAT5Q09328 741 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 HNRNPDQ14103 355 aaKnown RBP19.32■□□□□ 0.68
USP39-202ENST00000409025 LVRNQ6Q4G3 990 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 PIGWQ7Z7B1 504 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 UNC5BQ8IZJ1 945 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 TCP10LQ8TDR4 215 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 TRMT2BQ96GJ1 504 aaKnown RBP19.32■□□□□ 0.68
USP39-202ENST00000409025 ZNF419Q96HQ0 510 aaPredicted RBP19.32■□□□□ 0.68
USP39-202ENST00000409025 TBL1YQ9BQ87 522 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 SP110Q9HB58 689 aa19.32■□□□□ 0.68
USP39-202ENST00000409025 MRPL17Q9NRX2 175 aaKnown RBP19.32■□□□□ 0.68
USP39-202ENST00000409025 COCHO43405 550 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 ATP9BO43861 1147 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 RAMP2O60895 175 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 USP1O94782 785 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 SLC11A2P49281 568 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 PLD1Q13393 1074 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 CERCAMQ5T4B2 595 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 CES3Q6UWW8 571 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 SH2D5Q6ZV89 423 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 TMEM135Q86UB9 458 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 ZNF354CQ86Y25 554 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 LGI2Q8N0V4 545 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.31■□□□□ 0.68
USP39-202ENST00000409025 CCDC197Q8NCU1 140 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 NSMCE1Q8WV22 266 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 ZNF669Q96BR6 464 aaPredicted RBP19.31■□□□□ 0.68
USP39-202ENST00000409025 PLD4Q96BZ4 506 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 CERS2Q96G23 380 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 CABS1Q96KC9 395 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 FGFR1OP2Q9NVK5 253 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 ZNF212Q9UDV6 495 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 FAM237BA0A1B0GVD1 139 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 MT-CYBP00156 380 aaPredicted RBP19.31■□□□□ 0.68
USP39-202ENST00000409025 TAC1P20366 129 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 OR1E1P30953 314 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 FOXN2P32314 431 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 PPP3CCP48454 512 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 FRG1Q14331 258 aaKnown RBP19.31■□□□□ 0.68
USP39-202ENST00000409025 POLD3Q15054 466 aaPredicted RBP19.31■□□□□ 0.68
USP39-202ENST00000409025 PARP15Q460N3 678 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 OTOP2Q7RTS6 562 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 RASSF3Q86WH2 238 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 CNPY4Q8N129 248 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms