RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ARL13AQ5H913 290 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ARCQ7LC44 396 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 TMC7Q7Z402 723 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 DHDDSQ86SQ9 333 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 NPAS2Q99743 824 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 POMPQ9Y244 141 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CAPN14A8MX76 684 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ZBTB14O43829 449 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MAGEC1O60732 1142 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 GSTA2P09210 222 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CHRNA4P43681 627 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MAXP61244 160 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 DLG1Q12959 904 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 KYAT1Q16773 422 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MAP7D1Q3KQU3 841 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ARHGAP36Q6ZRI8 547 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 OR6Y1Q8NGX8 325 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 EPAS1Q99814 870 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 VCX3BQ9H321 246 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SFMBT1Q9UHJ3 866 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MMP3P08254 477 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ZBTB17Q13105 803 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF483Q8TF39 744 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 CPNE1Q99829 537 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 DUSP16Q9BY84 665 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 DTNAQ9Y4J8 743 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 NRF1Q16656 503 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 NPWQ8N729 165 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 KLHL4Q9C0H6 718 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 A6NHS1 94 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 KLF11O14901 512 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF470Q6ECI4 717 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 MAVSQ7Z434 540 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 SUDS3Q9H7L9 328 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 CCDC167Q9P0B6 97 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 XPR1Q9UBH6 696 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 IPPQ9Y573 584 aa12.9□□□□□ -0.34
PPP4R1-202ENST00000400555 DPYSL4O14531 572 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 CNTFP26441 200 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SCNN1GP51170 649 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 IRX1P78414 480 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SH2D4BQ5SQS7 431 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 ESRP1Q6NXG1 681 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 NXNL1Q96CM4 212 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 PAAF1Q9BRP4 392 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 M0QZ92 97 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 LRIG2O94898 1065 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 C1QAP02745 245 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 DARSP14868 501 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 HDCP19113 662 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 ITGAXP20702 1163 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 BRCC3P46736 316 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SNX17Q15036 470 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 C4orf22Q6V702 233 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 ATPAF2Q8N5M1 289 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.352e-7■■□□□ 14.2
PPP4R1-202ENST00000400555 SCAMP5Q8TAC9 235 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 HSFY1Q96LI6 401 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 ANLNQ9NQW6 1124 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 PIRTP0C851 137 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 CLEC20AQ6ZU45 233 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 IFNEQ86WN2 208 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 CDH19Q9H159 772 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
PPP4R1-202ENST00000400555 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms