RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TMC5Q6UXY8 1006 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 HEATR4Q86WZ0 1026 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 C8orf59Q8N0T1 100 aaPredicted RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 SETD9Q8NE22 299 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 RPRD1AQ96P16 312 aaPredicted RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 OMDQ99983 421 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 GPR63Q9BZJ6 419 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 NT5MQ9NPB1 228 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 DNAJC28Q9NX36 388 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 STK39Q9UEW8 545 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SH3GLB1Q9Y371 365 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 TPRKBQ9Y3C4 175 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ASNA1O43681 348 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SYNCRIPO60506 623 aaKnown RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 MLNP12872 115 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 INSRRP14616 1297 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 OAZ1P54368 228 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 CAPSQ13938 189 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 FAM9CQ8IZT9 166 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 MYO1HQ8N1T3 1032 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ADAM32Q8TC27 787 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 CEP44Q9C0F1 390 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 RAD21L1Q9H4I0 556 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ELP3Q9H9T3 547 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 PLA2G6O60733 806 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 VPS4BO75351 444 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 MED26O95402 600 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 ZNF682O95780 498 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 TPSB2P20231 275 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NOS2P35228 1153 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SLC7A2P52569 658 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 C6orf52Q5T4I8 152 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 VWA5B1Q5TIE3 1220 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 MARC1Q5VT66 337 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 ENDOVQ8N8Q3 282 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 TRAPPC12Q8WVT3 735 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 EDEM1Q92611 657 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 CIB1Q99828 191 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 USE1Q9NZ43 259 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SLC8A2Q9UPR5 921 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 RICTORQ6R327 1708 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 DYTNA2CJ06 578 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 HS6ST1O60243 411 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NFICP08651 508 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 CDH3P22223 829 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 ST13P50502 369 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 RENBPP51606 427 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 FKBP1AP62942 108 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 UBE3AQ05086 875 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 ILF2Q12905 390 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 MPP2Q14168 576 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 PGAM4Q8N0Y7 254 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 WNT8BQ93098 351 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NPAS2Q99743 824 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 PTPRHQ9HD43 1115 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 TMEM63AO94886 807 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 CCDC166P0CW27 439 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 GOT1P17174 413 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 ADSSP30520 456 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 LY6KQ17RY6 165 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SPRED3Q2MJR0 410 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 ZBTB46Q86UZ6 589 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 KBTBD2Q8IY47 623 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 OR7A2PQ8NGA2 310 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 MRPL57Q9BQC6 102 aaKnown RBP11.22□□□□□ -0.61
HPS4-202ENST00000398145 ENTPD7Q9NQZ7 604 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
HPS4-202ENST00000398145 LINC00854A0A1B0GVQ3 168 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 ATP6AP2A0A1C7CYW4 349 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 CNOT3O75175 753 aaKnown RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 ATP6AP2O75787 350 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 B3GAT3O94766 335 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 LTA4HP09960 611 aaKnown RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 CCNFP41002 786 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 ZNF135P52742 658 aaPredicted RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 AARS2Q5JTZ9 985 aaKnown RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 RSBN1Q5VWQ0 802 aaPredicted RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 SLC41A1Q8IVJ1 513 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 LZTR1Q8N653 840 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 SLC4A11Q8NBS3 891 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms