RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ITGA2BP08514 1039 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 FOXN2P32314 431 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 MAP3K10Q02779 954 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF177Q13360 481 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KHDC1Q4VXA5 237 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 SPANXN3Q5MJ09 141 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ERO1BQ86YB8 467 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 FAM126BQ8IXS8 530 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 FBXW8Q8N3Y1 598 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 APBB2Q92870 758 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KATNAL1Q9BW62 490 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 MMADHCQ9H3L0 296 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ALG9Q9H6U8 611 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 MAGEB16A2A368 324 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 SCAMP3O14828 347 aaKnown RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 LDLRP01130 860 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 BDNFP23560 247 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 MZF1P28698 734 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 GRIA4P48058 902 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 NRLP54845 237 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 JAM2P57087 298 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 GBE1Q04446 702 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ARHGEF7Q14155 803 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PGS1Q32NB8 556 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 FNBP1LQ5T0N5 605 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ZDHHC24Q6UX98 284 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 C11orf96Q7Z7L8 435 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ZC3H3Q8IXZ2 948 aaKnown RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 B3GALNT2Q8NCR0 500 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PPP1R2P1Q96PQ5 205 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 C17orf102A2RUQ5 167 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 NCAM2O15394 837 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PIRTP0C851 137 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 NFKB1P19838 968 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PRIM2P49643 509 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CDH13P55290 713 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PARP6Q2NL67 630 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 TAF2Q6P1X5 1199 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CENPLQ8N0S6 344 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 FBXO39Q8N4B4 442 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 METTL6Q8TCB7 284 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CPT1BQ92523 772 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 MFSD14AQ96MC6 490 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 DGCR6LQ9BY27 220 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 SENP6Q9GZR1 1112 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ACTR8Q9H981 624 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 RGS17Q9UGC6 210 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 NRXN2Q9P2S2 1712 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 DPPA5A6NC42 116 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PEX11AO75192 247 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 LRCH4O75427 683 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 BCL10O95999 233 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CCDC159P0C7I6 412 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CCDC166P0CW27 439 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CDK7P50613 346 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ADARP55265 1226 aaKnown RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 BFSP2Q13515 415 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PEX6Q13608 980 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 PFKFB4Q16877 469 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CACHD1Q5VU97 1274 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 UTS2BQ765I0 119 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 MARK2Q7KZI7 788 aaKnown RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 HPS6Q86YV9 775 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 DHRSXQ8N5I4 330 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 DNAJB14Q8TBM8 379 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 MAGEE2Q8TD90 523 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 SH3TC2Q8TF17 1288 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 FIZ1Q96SL8 496 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 GAD1Q99259 594 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 SYTL2Q9HCH5 934 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 ZC4H2Q9NQZ6 224 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 OR12D3Q9UGF7 316 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CORO1CQ9ULV4 474 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CHKBQ9Y259 395 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
CCDC40-204ENST00000397545 CAPN8A6NHC0 703 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CHRNB2P17787 502 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CHN2P52757 468 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CDH18Q13634 790 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ACBD5Q5T8D3 534 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 WSCD1Q658N2 575 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ANKS6Q68DC2 871 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 TIGD7Q6NT04 549 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SLC27A1Q6PCB7 646 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms