RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MYO18AQ92614 2054 aaKnown RBP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 CREB3O43889 395 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 METTL18O95568 372 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 FDFT1P37268 417 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 AVPR1AP37288 418 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 ZNF33AQ06730 810 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 TTC19Q6DKK2 380 aaPredicted RBP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 ZNF534Q76KX8 674 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 CAND1Q86VP6 1230 aaKnown RBP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 AGGF1Q8N302 714 aaeCLIP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 ATXN2LQ8WWM7 1075 aaKnown RBP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 FGF13Q92913 245 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 NECTIN4Q96NY8 510 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 SLC46A2Q9BY10 475 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 OLA1Q9NTK5 396 aaKnown RBP15.48■□□□□ 0.07
SCAF11-204ENST00000395454 OR12D3Q9UGF7 316 aa15.48■□□□□ 0.07
SCAF11-204ENST00000395454 TRAV19A0A0A6YYK7 116 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 BANF1O75531 89 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 MBL2P11226 248 aaPredicted RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 PPIDQ08752 370 aaKnown RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 GALNT2Q10471 571 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 WASHC5Q12768 1159 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ANKRD20A2Q5SQ80 823 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ANKRD20A1Q5TYW2 823 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ANKRD20A3Q5VUR7 823 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 TTC16Q8NEE8 873 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 P2RY11Q96G91 374 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ZSWIM3Q96MP5 696 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 LGMNQ99538 433 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 TASP1Q9H6P5 420 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 MARCH2Q9P0N8 246 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 DNMT3LQ9UJW3 386 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ERICH4A6NGS2 130 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 MSI1O43347 362 aaKnown RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 LRIG2O94898 1065 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 C1QAP02745 245 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 GSTA2P09210 222 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 MLNP12872 115 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SP100P23497 879 aaPredicted RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SLC18A1P54219 525 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SMAD4Q13485 552 aaKnown RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 KLHL38Q2WGJ6 581 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 KLHDC10Q6PID8 442 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 ANKMY2Q8IV38 441 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 IGDCC3Q8IVU1 814 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 NPAS3Q8IXF0 933 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 NPWQ8N729 165 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SUSD6Q92537 303 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 HDAC11Q96DB2 347 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 XPO6Q96QU8 1125 aaKnown RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 FERMT1Q9BQL6 677 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 VPS37BQ9H9H4 285 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 XAB2Q9HCS7 855 aaKnown RBP15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SMPD4Q9NXE4 827 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 SENP1Q9P0U3 644 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 IGSF9Q9P2J2 1179 aa15.47■□□□□ 0.07
SCAF11-204ENST00000395454 DOCK4Q8N1I0 1966 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 DOCK8Q8NF50 2099 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 NUP205Q92621 2012 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 GRXCR2A6NFK2 248 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 KCNU1A8MYU2 1149 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 RNF103O00237 685 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 MTSS1O43312 755 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 MBTPS2O43462 519 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 STK10O94804 968 aaKnown RBP15.46■□□□□ 0.07
SCAF11-204ENST00000395454 APRTP07741 180 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 CHN1P15882 459 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 SSTR1P30872 391 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 SERPINB6P35237 376 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 ELK3P41970 407 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 ARHGEF18Q6ZSZ5 1173 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 TRABD2AQ86V40 505 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 CMTM8Q8IZV2 173 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 ZNF276Q8N554 614 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 BCAS4Q8TDM0 211 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 SLC39A13Q96H72 371 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 SERPINB11Q96P15 392 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 SMG9Q9H0W8 520 aaKnown RBP15.46■□□□□ 0.07
SCAF11-204ENST00000395454 PRDM6Q9NQX0 595 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 A0A0C4DFX4 3053 aa15.46■□□□□ 0.07
SCAF11-204ENST00000395454 OLFM2O95897 454 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 FAM107AO95990 144 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 HMBSP08397 361 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 MX2P20592 715 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 CCR1P32246 355 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 GBP2P32456 591 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 GEMIN4P57678 1058 aaKnown RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 TFF2Q03403 129 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 HP1BP3Q5SSJ5 553 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 POTEHQ6S545 545 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 C3orf62Q6ZUJ4 267 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 TAB3Q8N5C8 712 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 ZSCAN18Q8TBC5 510 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 PLAC1Q9HBJ0 212 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 PSMC3IPQ9P2W1 217 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 ZMYM5Q9UJ78 669 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms