RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CYP1A2P05177 515 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CHRNB1P11230 501 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TOP1P11387 765 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CD1EP15812 388 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AOAHP28039 575 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DCTP40126 519 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 WNT3P56703 355 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 RPL11P62913 178 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FAM160A1Q05DH4 1040 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SSRP1Q08945 709 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZBTB17Q13105 803 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MYBPHQ13203 477 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 LY6DQ14210 128 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 KRT31Q15323 416 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CDKN3Q16667 212 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SMTNL2Q2TAL5 461 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C8orf34Q49A92 452 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AWAT1Q58HT5 328 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 Q5BKY6 102 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C10orf91Q5T1B1 145 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C10orf76Q5T2E6 689 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FAAH2Q6GMR7 532 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PWWP2BQ6NUJ5 590 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 KCNK18Q7Z418 384 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CPEB2Q7Z5Q1 589 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZSCAN30Q86W11 494 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MEX3DQ86XN8 651 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TRIM50Q86XT4 487 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SUN3Q8TAQ9 357 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DCAF4Q8WV16 495 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZFAND2BQ8WV99 257 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 BTN2A2Q8WVV5 523 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PTPRN2Q92932 1015 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TMEM125Q96AQ2 219 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FKBP10Q96AY3 582 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TIFAQ96CG3 184 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 GMPPAQ96IJ6 420 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TNIP3Q96KP6 325 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PHACTR3Q96KR7 559 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF385AQ96PM9 386 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TRAPPC9Q96Q05 1148 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SPIN2AQ99865 258 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SPIN2BQ9BPZ2 258 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF251Q9BRH9 671 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SHARPINQ9H0F6 387 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SPNS1Q9H2V7 528 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 UBQLN3Q9H347 655 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 EDA2RQ9HAV5 297 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 KRCC1Q9NPI7 259 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CYP26B1Q9NR63 512 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ARHGEF4Q9NR80 690 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PLCXD1Q9NUJ7 323 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TYW1Q9NV66 732 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FLRT3Q9NZU0 649 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ARHGAP28Q9P2N2 729 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SLCO3A1Q9UIG8 710 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SLC45A2Q9UMX9 530 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DNAJC16Q9Y2G8 782 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 RBM19Q9Y4C8 960 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AHCTF1Q8WYP5 2266 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PNPLA7Q6ZV29 1317 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 A0A0G2JN53 185 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 A0A1W2PNN7 141 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 C3orf84H3BNL1 204 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 I6L893 689 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 STXBP3O00186 592 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ARNTLO00327 626 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PIK3CDO00329 1044 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KRIT1O00522 736 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PDXKO00764 312 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RTN2O75298 545 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 STAM2O75886 525 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TJP3O95049 919 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HPP00738 406 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GNAI2P04899 355 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGKV5-2P06315 115 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CISD3P0C7P0 127 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ENGP17813 658 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SPRR2EP22531 72 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CD6P30203 668 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HOXA13P31271 388 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PTPN9P43378 593 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC6A12P48065 614 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ALDH9A1P49189 494 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GTF2A2P52657 109 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CHMP4BP1P59074 171 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ABCE1P61221 599 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RPS7P62081 194 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPNMBQ14956 572 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TBCCQ15814 346 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PTCHD3Q3KNS1 767 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GXYLT1Q4G148 440 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCNYL2Q5T2Q4 361 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPR158Q5T848 1215 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SFMBT2Q5VUG0 894 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OTUD1Q5VV17 481 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GRHL2Q6ISB3 625 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC27A1Q6PCB7 646 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 Q75L30 129 aa-2.1□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OVCH1Q7RTY7 1134 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms