RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 H0Y8X5 98 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 MCF2LO15068 1137 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 LATO43561 262 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 DKK1O94907 266 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 ZNF18P17022 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 STK19P49842 368 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-202ENST00000381208 SULT1E1P49888 294 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 DLG2Q15700 870 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TCP11X2Q5H9J9 407 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 C6orf118Q5T5N4 469 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3GQ6DHY5 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 CCNI2Q6ZMN8 369 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-202ENST00000381208 IQCHQ86VS3 1027 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 CIR1Q86X95 450 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-202ENST00000381208 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 AADATQ8N5Z0 425 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 SLC6A18Q96N87 628 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 HAPLN3Q96S86 360 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 SIK2Q9H0K1 926 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 MUC3BQ9H195 1237 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 RETREG1Q9H6L5 497 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 AASDHPPTQ9NRN7 309 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 PIGVQ9NUD9 493 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 PPM1HQ9ULR3 514 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 OR51B4Q9Y5P0 310 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 DRGXA6NNA5 263 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 RHOCP08134 193 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 CENPCQ03188 943 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 KCNMA1Q12791 1236 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 DPY19L2P1Q6NXN4 242 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 TMPRSS7Q7RTY8 843 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 SLCO6A1Q86UG4 719 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 MFSD2AQ8NA29 543 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 DCAF4L2Q8NA75 395 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 SERAC1Q96JX3 654 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 NAA15Q9BXJ9 866 aaKnown RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ERVMER34-1Q9H9K5 563 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 AJAP1Q9UKB5 411 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ACACAQ13085 2346 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 CXorf51AA0A1B0GTR3 108 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 SRRM3A6NNA2 597 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 F8VZ95 297 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 RNGTTO60942 597 aaKnown RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PRNPP04156 253 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 DRD3P35462 400 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 SLC20A2Q08357 652 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-202ENST00000381208 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PNPLA1Q8N8W4 532 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PIP4K2CQ8TBX8 421 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 FTSJ1Q9UET6 329 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 PCDHGA1Q9Y5H4 931 aa13.32□□□□□ -0.28
RPAIN-202ENST00000381208 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 A0A1W2PR77 199 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 ILVBLA1L0T0 632 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 E9PAM4 449 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 TLR4O00206 839 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 ADCY5O95622 1261 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 ITGAVP06756 1048 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 C1SP09871 688 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-202ENST00000381208 ETFBP38117 255 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 RXRGP48443 463 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 ARL13BQ3SXY8 428 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 OTUD1Q5VV17 481 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-202ENST00000381208 RETSATQ6NUM9 610 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 LAYNQ6UX15 382 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 TRIM72Q6ZMU5 477 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 Q6ZVU0 165 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 PROSER1Q86XN7 944 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 TMIEQ8NEW7 156 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 FAM174AQ8TBP5 190 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 EPS8L1Q8TE68 723 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 TBCBQ99426 244 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 CEP44Q9C0F1 390 aa13.31□□□□□ -0.28
RPAIN-202ENST00000381208 CCDC86Q9H6F5 360 aaKnown RBP13.31□□□□□ -0.28
RPAIN-202ENST00000381208 EBF2Q9HAK2 575 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms