RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 COQ6Q9Y2Z9 468 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 AP1G1O43747 822 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 LTFP02788 710 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ALDH2P05091 517 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 L1CAMP32004 1257 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 MRPS22P82650 360 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 TEX44Q53QW1 395 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 MAVSQ7Z434 540 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 MAPK15Q8TD08 544 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CDKL2Q92772 493 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 OR52B2Q96RD2 323 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CCDC106Q9BWC9 280 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 NUF2Q9BZD4 464 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ANLNQ9NQW6 1124 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 SETD4Q9NVD3 440 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CSADQ9Y600 493 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 SCN1AP35498 2009 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 FUOMA2VDF0 154 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 TGDSO95455 350 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 THRAP10827 490 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 IDH3AP50213 366 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 ADIGQ0VDE8 80 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 OGFOD2Q6N063 350 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 CATSPER4Q7RTX7 472 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 ADGRG6Q86SQ4 1221 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 C14orf80Q86SX3 495 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 CDKL3Q8IVW4 592 aaPredicted RBP12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 MARVELD2Q8N4S9 558 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM167AQ96KS9 214 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 OSMRQ99650 979 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.38
PRPF40B-202ENST00000380281 SDR42E2A6NKP2 422 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 M0QYT0 321 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 FGF3P11487 239 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 ADCYAP1R1P41586 468 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 CLCN2P51788 898 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 SLC5A3P53794 718 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 TMA16Q96EY4 203 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 C7orf26Q96N11 449 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 NXF3Q9H4D5 531 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 COG4Q9H9E3 785 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 COL2A1P02458 1487 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 TK2O00142 265 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 ZBTB14O43829 449 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 PLIN3O60664 434 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 SPAG6O75602 509 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 COL11A1P12107 1806 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 CPA3P15088 417 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 ICAM3P32942 547 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 CRHR1P34998 444 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 OAZ1P54368 228 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 PCLAFQ15004 111 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 WDR81Q562E7 1941 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 NAPRTQ6XQN6 538 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 KYAT3Q6YP21 454 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 TRIML2Q8N7C3 387 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 EDEM1Q92611 657 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 LENG8Q96PV6 779 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 SMARCAD1Q9H4L7 1026 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 POMPQ9Y244 141 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
PRPF40B-202ENST00000380281 FUCA1P04066 466 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SERPINA6P08185 405 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 OCM2P0CE71 109 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 OCMP0CE72 109 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 PRKCHP24723 683 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 MPSTP25325 297 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 PDK2Q15119 407 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SYPL2Q5VXT5 272 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 LCLAT1Q6UWP7 414 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CASP10Q92851 521 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FCRL3Q96P31 734 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms