RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PTPN1P18031 435 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 NEDD8Q15843 81 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 INSCQ1MX18 579 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PQLC1Q8N2U9 271 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 P2RY11Q96G91 374 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 NTPCRQ9BSD7 190 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 DNAJC28Q9NX36 388 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 LRP6O75581 1613 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 CCDC154A6NI56 674 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 VPS4BO75351 444 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 BCL10O95999 233 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 SNRPB2P08579 225 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 KLRC2P26717 231 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 NUMBP49757 651 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 TTC23LQ6PF05 361 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 LCLAT1Q6UWP7 414 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 TFAP2DQ7Z6R9 452 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 TFAP2BQ92481 460 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 GLMNQ92990 594 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 GORASP1Q9BQQ3 440 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 ELOVL4Q9GZR5 314 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 SPAG4Q9NPE6 437 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 MLNP12872 115 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SLC11A2P49281 568 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 DEFA1P59665 94 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 DEFA3P59666 94 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 TRAF2Q12933 501 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SYTL3Q4VX76 610 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SH3GL1Q99961 368 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 RMND5AQ9H871 391 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 COPG2Q9UBF2 871 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-202ENST00000373779 IQCA1LA6NCM1 817 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 PAPSS1O43252 624 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-202ENST00000373779 ZNF862O60290 1169 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SIN3BO75182 1162 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 MATKP42679 507 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 GSCP56915 257 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-202ENST00000373779 RAB10P61026 200 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 ZNF177Q13360 481 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-202ENST00000373779 NR6A1Q15406 480 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 TTLL9Q3SXZ7 439 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 CAMK1DQ8IU85 385 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 VPS33AQ96AX1 596 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 TSC22D4Q9Y3Q8 395 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 RIPK3Q9Y572 518 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 LYNP07948 512 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 KLF10Q13118 480 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 PIWIL4Q7Z3Z4 852 aaKnown RBP17.68■□□□□ 0.42
PTPRU-202ENST00000373779 VNN1O95497 513 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 OXCT1P55809 520 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 ANKS6Q68DC2 871 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 ELMOD1Q8N336 334 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 SEC14L1Q92503 715 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 PSMD13Q9UNM6 376 aa17.68■□□□□ 0.42
PTPRU-202ENST00000373779 PSMD7P51665 324 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 SLC18A1P54219 525 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 CAB39LQ9H9S4 337 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 CXCL11O14625 94 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 MYO1HQ8N1T3 1032 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 RNF145Q96MT1 663 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 CSPG4P5Q96PW8 444 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 OMDQ99983 421 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 MRPL45Q9BRJ2 306 aaKnown RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 XPR1Q9UBH6 696 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ATP11BQ9Y2G3 1177 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 C15orf38-AP3S2A0A0A6YYH1 394 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ARHGEF9O43307 516 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ECHS1P30084 290 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 GRIA3P42263 894 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 TAF5Q15542 800 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ARPINQ7Z6K5 226 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 FNDC5Q8NAU1 212 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 MRPL57Q9BQC6 102 aaKnown RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ALG9Q9H6U8 611 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 XPNPEP1Q9NQW7 623 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 UTP6Q9NYH9 597 aaKnown RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 TRAFD1O14545 582 aaPredicted RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 RAD23AP54725 363 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 GBE1Q04446 702 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 KRT33BQ14525 404 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 VPS37AQ8NEZ2 397 aa17.67■□□□□ 0.42
PTPRU-202ENST00000373779 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
PTPRU-202ENST00000373779 ZSCAN9O15535 394 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 PEX11AO75192 247 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 CCDC166P0CW27 439 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 THPOP40225 353 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 CWF19L1Q69YN2 538 aaKnown RBP17.66■□□□□ 0.42
PTPRU-202ENST00000373779 NETO2Q8NC67 525 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 SLC12A8A0AV02 714 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 CABYRO75952 493 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 ERCC2P18074 760 aa17.66■□□□□ 0.42
PTPRU-202ENST00000373779 SERPINH1P50454 418 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms