RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 DPF3Q92784 378 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ARHGEF26Q96DR7 871 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 B3GALT6Q96L58 329 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TMEM209Q96SK2 561 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TMEM175Q9BSA9 504 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 HTATIP2Q9BUP3 242 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 APOL5Q9BWW9 433 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 VN1R3Q9BXE9 311 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 FAM124BQ9H5Z6 455 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 LZTFL1Q9NQ48 299 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 RRAGDQ9NQL2 400 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 AP5S1Q9NUS5 200 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SEPT11Q9NVA2 429 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 PAXBP1Q9Y5B6 917 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PCDHGB6Q9Y5F9 930 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 MYBPHLA2RUH7 354 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 KLHL33A6NCF5 533 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TULP2O00295 520 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ZSCAN12O43309 604 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 RTN2O75298 545 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TADA2AO75478 443 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 H2AFZP0C0S5 128 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 LINC00271P0C7V0 271 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SETSIPP0DME0 302 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GZMAP12544 262 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 CCDC130P13994 396 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PTPN1P18031 435 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 TYMPP19971 482 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MSNP26038 577 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 TKTP29401 623 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 CDH5P33151 784 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 LHX1P48742 406 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PSMC1P62191 440 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 NOMO3P69849 1222 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 HTRA4P83105 476 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 AMPD2Q01433 879 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 CLUL1Q15846 466 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GOLGA7BQ2TAP0 167 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 C2CD6Q53TS8 623 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 LCLAT1Q6UWP7 414 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 H2AFVQ71UI9 128 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PHLDB2Q86SQ0 1253 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 KIAA1328Q86T90 577 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 VPS36Q86VN1 386 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TTC30AQ86WT1 665 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TMEM86AQ8N2M4 240 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 LRRC43Q8N309 656 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ANKS4BQ8N8V4 417 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 FBXO15Q8NCQ5 510 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 PPP1R35Q8TAP8 253 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 UBA3Q8TBC4 463 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PKMYT1Q99640 499 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 COLEC11Q9BWP8 271 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SGPP1Q9BX95 441 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MRPL9Q9BYD2 267 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 B3GNT5Q9BYG0 378 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 LHX5Q9H2C1 402 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 FAM49BQ9NUQ9 324 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TMLHEQ9NVH6 421 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 DDX43Q9NXZ2 648 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 PPARGC1AQ9UBK2 798 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 CHORDC1Q9UHD1 332 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 ADAM28Q9UKQ2 775 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 KIAA1257Q9ULG3 409 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 CBLCQ9ULV8 474 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ZNF281Q9Y2X9 895 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 VWA8A3KMH1 1905 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TSC2P49815 1807 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 CCDC66A2RUB6 948 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 DBX1A6NMT0 343 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 F5H423 210 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 CLDN5O00501 218 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TBC1D4O60343 1298 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 OAZ2O95190 189 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GJB5O95377 273 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 KRT1P04264 644 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TMEM253P0C7T8 217 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ODC1P11926 461 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GPD2P43304 727 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MAGEA10P43363 369 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 RABGGTBP53611 331 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GPR85P60893 370 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 BTG3Q14201 252 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 TERF2Q15554 542 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MDH1BQ5I0G3 518 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 C9orf50Q5SZB4 431 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 C10orf76Q5T2E6 689 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ADGRF1Q5T601 910 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 FAM171A1Q5VUB5 890 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 ARHGAP17Q68EM7 881 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 FAM109BQ6ICB4 259 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 FAM171BQ6P995 826 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 RSPO2Q6UXX9 243 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 TRIM72Q6ZMU5 477 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MON1BQ7L1V2 547 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 OVCH2Q7RTZ1 564 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 C11orf74Q86VG3 221 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PHF13Q86YI8 300 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms