RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 LMBR1Q8WVP7 490 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC5A11Q8WWX8 675 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 DHX58Q96C10 678 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 FAM120BQ96EK7 910 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 FCRL2Q96LA5 508 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SAMD11Q96NU1 681 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ACAP3Q96P50 834 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 GBP5Q96PP8 586 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 CCDC106Q9BWC9 280 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC12A9Q9BXP2 914 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 GCOM2Q9BZD3 368 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 KRT23Q9C075 422 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 POLE3Q9NRF9 147 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 AKAP7Q9P0M2 348 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SPATA7Q9P0W8 599 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 CLEC4AQ9UMR7 237 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 CAMK2AQ9UQM7 478 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 MED16Q9Y2X0 877 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 BACE2Q9Y5Z0 518 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC4A4Q9Y6R1 1079 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ATG2AQ2TAZ0 1938 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 NF1P21359 2839 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SIP14410 1827 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SPEF2Q9C093 1822 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CSMD1Q96PZ7 3565 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 A0A1B0GUL7 405 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 C16orf96A6NNT2 1141 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 A8MXE2 369 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 AQP7O14520 342 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 AURKAO14965 403 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 GRM6O15303 877 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ADCY6O43306 1168 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PHF2O75151 1096 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 IL18RAPO95256 599 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 GJB5O95377 273 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 OLFM2O95897 454 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 HOXC6P09630 235 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF24P17028 368 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 JUNBP17275 347 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM21P19474 475 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 EEF1GP26641 437 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 RPL10P27635 214 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ADORA2AP29274 412 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 GDI1P31150 447 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ARL3P36405 182 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CCR9P51686 369 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ACTR1AP61163 376 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PSMC6P62333 389 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CD83Q01151 205 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CREMQ03060 361 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TROAPQ12815 778 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TRAF1Q13077 416 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 DAG1Q14118 895 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SEC23AQ15436 765 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC35G1Q2M3R5 365 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 DUSP28Q4G0W2 176 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC39A12Q504Y0 691 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 RCSD1Q6JBY9 416 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TAF2Q6P1X5 1199 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ARHGAP11AQ6P4F7 1023 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TMEM154Q6P9G4 183 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PET117Q6UWS5 81 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CYP2R1Q6VVX0 501 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 MEX3BQ6ZN04 569 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 FAM83AQ86UY5 434 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 METTL23Q86XA0 190 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PROSER1Q86XN7 944 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 AOPEPQ8N6M6 819 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 NAT16Q8N8M0 369 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ZBTB8BQ8NAP8 495 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 KLHDC9Q8NEP7 349 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 IFI44Q8TCB0 444 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TBC1D5Q92609 795 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 MUL1Q969V5 352 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF566Q969W8 418 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 GLT1D1Q96MS3 346 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CDADC1Q9BWV3 514 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 FUT8Q9BYC5 575 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 MMADHCQ9H3L0 296 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PRDM13Q9H4Q3 707 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 C8orf33Q9H7E9 229 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 HOMER3Q9NSC5 361 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CCM2LQ9NUG4 571 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 ATAD3AQ9NVI7 634 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CHMP5Q9NZZ3 219 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TBC1D7Q9P0N9 293 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 HDAC6Q9UBN7 1215 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 TMEM59LQ9UK28 342 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CNOT6Q9ULM6 557 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 SORCS3Q9UPU3 1222 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 AURKCQ9UQB9 309 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 PIN4Q9Y237 131 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 CCL27Q9Y4X3 112 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 NPFFR2Q9Y5X5 522 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 GRIN2DO15399 1336 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 MROH7Q68CQ1 1323 aa3.66□□□□□ -1.82
ECHDC1-205ENST00000368295 FANCMQ8IYD8 2048 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 LOC100653049A0A140TA62 436 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms