RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CPSF3Q9UKF6 684 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 PIN4Q9Y237 131 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 E5RJQ4 531 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 LILRB3O75022 631 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 DDHD2O94830 711 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 IL18RAPO95256 599 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 ENO1P06733 434 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 MLNP12872 115 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 GRK2P25098 689 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 CPOXP36551 454 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 ASPAP45381 313 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 AFF1P51825 1210 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 PSMC1P62191 440 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 TRPC3Q13507 836 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 CHI3L2Q15782 390 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 HSF5Q4G112 596 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 RARS2Q5T160 578 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 STEAP4Q687X5 459 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 DARS2Q6PI48 645 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 PRPF39Q86UA1 669 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 ZNF280BQ86YH2 543 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 EGFL6Q8IUX8 553 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 CDKL3Q8IVW4 592 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 FAM71DQ8N9W8 422 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 DRAXINQ8NBI3 349 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 OR6Y1Q8NGX8 325 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 JOSD2Q8TAC2 188 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 DTX3LQ8TDB6 740 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 TFAP2BQ92481 460 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 KLF6Q99612 283 aaPredicted RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 CNPY3Q9BT09 278 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 SMOC2Q9H3U7 446 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 ZWILCHQ9H900 591 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 USP29Q9HBJ7 922 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 XAB2Q9HCS7 855 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 PLK2Q9NYY3 685 aa11.79□□□□□ -0.52
USF1-201ENST00000368019 ZC3H7BQ9UGR2 993 aaKnown RBP11.79□□□□□ -0.52
USF1-201ENST00000368019 DOCK6Q96HP0 2047 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 A0A088AWK7 358 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 LRRIQ4A6NIV6 560 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
USF1-201ENST00000368019 EFEMP2O95967 443 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 TNNC2P02585 160 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ERBB2P04626 1255 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 UQCRBP14927 111 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 GPD1P21695 349 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 MIPP30301 263 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ATICP31939 592 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 HK2P52789 917 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 MYL6P60660 151 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 DYNLT1P63172 113 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 TUBB3Q13509 450 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 STILQ15468 1287 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ZNF699Q32M78 642 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 CNPY1Q3B7I2 92 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 BOLA3Q53S33 107 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 SLC9A4Q6AI14 798 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 DENND1BQ6P3S1 775 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 CDHR3Q6ZTQ4 885 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 PPM1NQ8N819 430 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
USF1-201ENST00000368019 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 PGBD4Q96DM1 585 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ZBTB45Q96K62 511 aaPredicted RBP11.78□□□□□ -0.52
USF1-201ENST00000368019 ACAP3Q96P50 834 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 ZNF670Q9BS34 389 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
USF1-201ENST00000368019 FAM86C1Q9NVL1 165 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 TMCO1Q9UM00 188 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 INPP5FQ9Y2H2 1132 aa11.78□□□□□ -0.52
USF1-201ENST00000368019 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.52
USF1-201ENST00000368019 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 PROB1E7EW31 1015 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 APOL1O14791 398 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms