RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ADGRE1Q14246 886 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PRPSAP1Q14558 356 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 TBC1D25Q3MII6 688 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 LPCAT2Q7L5N7 544 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SIX6OS1Q8N1H7 587 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 METTL25Q8N6Q8 603 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 CATSPER1Q8NEC5 780 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SLC7A14Q8TBB6 771 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 CELF6Q96J87 481 aaKnown RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 GPR20Q99678 358 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 RBBP8Q99708 897 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 CIB1Q99828 191 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 NAT9Q9BTE0 207 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 FZD8Q9H461 694 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 CHST12Q9NRB3 414 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PTTG2Q9NZH5 202 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ZDHHC2Q9UIJ5 367 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 KCNU1A8MYU2 1149 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 C19orf81C9J6K1 198 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 VAPBO95292 243 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ZNF286BP0CG31 522 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ACAT1P24752 427 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 CDKL1Q00532 357 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 CDK18Q07002 472 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 CEACAM7Q14002 265 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 GRM3Q14832 879 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 POU6F1Q14863 301 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 DPYSL2Q16555 572 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 KIZQ2M2Z5 673 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 OGFRL1Q5TC84 451 aaPredicted RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 IL23RQ5VWK5 629 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TRIM67Q6ZTA4 783 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 RPS27LQ71UM5 84 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 SLC41A1Q8IVJ1 513 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 CHST13Q8NET6 341 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TSPAN14Q8NG11 270 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ARNTL2Q8WYA1 636 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ZFRQ96KR1 1074 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 PRICKLE1Q96MT3 831 aaPredicted RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 MRPS26Q9BYN8 205 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 SMARCAD1Q9H4L7 1026 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TRPC7Q9HCX4 862 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 PDGFCQ9NRA1 345 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 THEGQ9P2T0 379 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 XPR1Q9UBH6 696 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TUBGCP4Q9UGJ1 667 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ATP6AP2A0A1C7CYW4 349 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 MAGEB3O15480 346 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ATP6AP2O75787 350 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 JUNP05412 331 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 TSPAN8P19075 237 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 HDCP19113 662 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 AKAP5P24588 427 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ICAM3P32942 547 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 HARS2P49590 506 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 TPI1P60174 286 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 PLOD1Q02809 727 aaPredicted RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 CTBP1Q13363 440 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 KCTD2Q14681 263 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 AGKQ53H12 422 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 SPANXN3Q5MJ09 141 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 RWDD4Q6NW29 188 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 KLC3Q6P597 504 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 LRTOMTQ8WZ04 291 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 CXCL16Q9H2A7 254 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 PDZD7Q9H5P4 517 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 ASB7Q9H672 318 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 CHCHD3Q9NX63 227 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 TMCO1Q9UM00 188 aa8.33□□□□□ -1.08
CD46-208ENST00000367042 TDRKHQ9Y2W6 561 aaKnown RBP8.33□□□□□ -1.08
CD46-208ENST00000367042 SAC3D1A6NKF1 404 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CLDN5O00501 218 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 VILLO15195 856 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 GAS2O43903 313 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 HBP1O60381 514 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 JCHAINP01591 159 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 SMIM18P0DKX4 95 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ARSAP15289 507 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PTPN1P18031 435 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 LMO2P25791 158 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PCSK6P29122 969 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 GNL1P36915 607 aaPredicted RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 MAGEA3P43357 314 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 LIMK2P53671 638 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CDH15P55291 814 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MYBPC1Q00872 1141 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 INSCQ1MX18 579 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MTX3Q5HYI7 312 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PITRM1Q5JRX3 1037 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CATSPER4Q7RTX7 472 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 EXOC8Q8IYI6 725 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 LILRA2Q8N149 483 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 RP9Q8TA86 221 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms