RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GPRIN1Q7Z2K8 1008 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 FIBCD1Q8N539 461 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 ATAD1Q8NBU5 361 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 ZMIZ2Q8NF64 920 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 EPAS1Q99814 870 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 SIKE1Q9BRV8 207 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 PPARGC1AQ9UBK2 798 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 PPM1HQ9ULR3 514 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC27A5Q9Y2P5 690 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 INSL6Q9Y581 213 aa12.97□□□□□ -0.33
RTFDC1-202ENST00000357348 GBF1Q92538 1859 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 SDR42E2A6NKP2 422 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 BIRC5O15392 142 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PAPSS1O43252 624 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 ENDOD1O94919 500 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PABPC4LP0CB38 370 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 MAGEA10P43363 369 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 GPR15P49685 360 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 DYNLT1P63172 113 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 BTKQ06187 659 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 HADHQ16836 314 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 ARHGAP22Q7Z5H3 698 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 SDCCAG8Q86SQ7 713 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PDSS2Q86YH6 399 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 GPR152Q8TDT2 470 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 HERVK_113Q902F9 699 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 MTBPQ96DY7 904 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 VCX3BQ9H321 246 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 S100A14Q9HCY8 104 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 COMMD3-BMI1R4GMX3 469 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 PLXNA4Q9HCM2 1894 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 MYO9BQ13459 2157 aa12.96□□□□□ -0.33
RTFDC1-202ENST00000357348 CCNT2O60583 730 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 KRT37O76014 449 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 LAG3P18627 525 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 PAX3P23760 479 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 GRIK1P39086 918 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 MAGEA6P43360 314 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 LSAMPQ13449 338 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 NOMO1Q15155 1222 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 USP41Q3LFD5 358 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 KCNT1Q5JUK3 1230 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 MARK2Q7KZI7 788 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 ARID3BQ8IVW6 561 aaPredicted RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 FAM71DQ8N9W8 422 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 CLPTM1LQ96KA5 538 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 DDX50Q9BQ39 737 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 CENPKQ9BS16 269 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 THTPAQ9BU02 230 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 ZCWPW1Q9H0M4 648 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 EPB41L1Q9H4G0 881 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-202ENST00000357348 XPO1O14980 1071 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 AP1G1O43747 822 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 ZCCHC18P0CG32 403 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SETSIPP0DME0 302 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 OR1D2P34982 312 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SH3BGRP55822 239 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 BASP1P80723 227 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 TMPRSS15P98073 1019 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 TUBB3Q13509 450 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SHHQ15465 462 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 DDR2Q16832 855 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 C1orf146Q5VVC0 180 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 PGM2L1Q6PCE3 622 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 ARCQ7LC44 396 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 EZH1Q92800 747 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 RTP4Q96DX8 246 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SPG21Q9NZD8 308 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
RTFDC1-202ENST00000357348 PRR5-ARHGAP8B1AHC4 643 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 MCF2LO15068 1137 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 FGF18O76093 207 aa12.94□□□□□ -0.34
RTFDC1-202ENST00000357348 BPGMP07738 259 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms