RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 MAML1Q92585 1016 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 FATE1Q969F0 183 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
HOXA1-202ENST00000355633 IL12RB2Q99665 862 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 MAGEH1Q9H213 219 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 TDP1Q9NUW8 608 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 DZANK1Q9NVP4 752 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 CCL26Q9Y258 94 aa13.92□□□□□ -0.18
HOXA1-202ENST00000355633 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 J3KR12 359 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 AGPSO00116 658 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 GFRA2O00451 464 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 EIF3HO15372 352 aaKnown RBP eCLIP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 NEBLO76041 1014 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 PAPLNO95428 1278 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 CEBPBP17676 345 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 NFKB1P19838 968 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 CD68P34810 354 aaPredicted RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 CDK16Q00536 496 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 GNA12Q03113 381 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 IL10RBQ08334 325 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 SLC29A2Q14542 456 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 SETD3Q86TU7 594 aaPredicted RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 CNTD1Q8N815 330 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 PDCD7Q8N8D1 485 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 TDRD5Q8NAT2 981 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 NSMCE1Q8WV22 266 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 ARHGEF2Q92974 986 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 C9orf72Q96LT7 481 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 SERPINB12Q96P63 405 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 EIF2B3Q9NR50 452 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 NINJ2Q9NZG7 142 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 A0A0D9SEW6 157 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 ILVBLA1L0T0 632 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 E7ESA3 106 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 TTC4O95801 387 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 RENBPP51606 427 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 SARNPP82979 210 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 HNRNPDQ14103 355 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 FASTKD3Q14CZ7 662 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 KYNUQ16719 465 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 BBS9Q3SYG4 887 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 IL31Q6EBC2 164 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 ZBED8Q8IZ13 594 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 OR52K2Q8NGK3 314 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
HOXA1-202ENST00000355633 FAM53CQ9NYF3 392 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 TBC1D30Q9Y2I9 924 aa13.91□□□□□ -0.18
HOXA1-202ENST00000355633 RANBP2P49792 3224 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 H0Y626 953 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ALOX15BO15296 676 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 BANF1O75531 89 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 PRAMEF12O95522 483 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ACSL3O95573 720 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 PEX11BO96011 259 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 NUDT17P0C025 328 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 MTM1Q13496 603 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 PRPSAP1Q14558 356 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 MSS51Q4VC12 460 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 HP1BP3Q5SSJ5 553 aaPredicted RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 CARNMT1Q8N4J0 409 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 OR7D4Q8NG98 312 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 OR2W6PQ8NHA6 318 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ITFG1Q8TB96 612 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 TTC25Q96NG3 672 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 TTLL3Q9Y4R7 772 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 NFS1Q9Y697 457 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 C2orf16Q68DN1 1984 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 PRAMEF11O60813 436 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 LUC7L3O95232 432 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 HLA-DQB2P05538 268 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ETFBP38117 255 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 HYAL1Q12794 435 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 HSP90B2PQ58FF3 399 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 MARC1Q5VT66 337 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 CXorf57Q6NSI4 855 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 CAND1Q86VP6 1230 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 UHMK1Q8TAS1 419 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 RIN3Q8TB24 985 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF419Q96HQ0 510 aaPredicted RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 ZSWIM3Q96MP5 696 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 GORASP1Q9BQQ3 440 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 SPON2Q9BUD6 331 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 GLOD4Q9HC38 313 aa13.9□□□□□ -0.18
HOXA1-202ENST00000355633 XAB2Q9HCS7 855 aaKnown RBP13.9□□□□□ -0.18
HOXA1-202ENST00000355633 GOLGA6CA6NDK9 693 aa13.89□□□□□ -0.19
HOXA1-202ENST00000355633 ERI2A8K979 691 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms